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Protein
Submitted name:

Alpha-amylase AmyS

Gene

amyS

Organism
Bacillus thuringiensis Bt407
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

Sites

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Active sitei261 – 2611NucleophileUniRule annotation
Active sitei291 – 2911Proton donorUniRule annotation

GO - Molecular functioni

  1. alpha-amylase activity Source: UniProtKB-EC
  2. calcium ion binding Source: InterPro

GO - Biological processi

  1. carbohydrate metabolic process Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

GlycosidaseImported, Hydrolase

Names & Taxonomyi

Protein namesi
Submitted name:
Alpha-amylase AmySImported (EC:3.2.1.1Imported)
Submitted name:
Glucan 1,4-alpha-maltohexaosidaseImported
Gene namesi
Name:amySImported
ORF Names:BTB_c35500Imported, bthur0002_32030Imported
OrganismiBacillus thuringiensis Bt407Imported
Taxonomic identifieri527021 [NCBI]
Taxonomic lineageiBacteriaFirmicutesBacilliBacillalesBacillaceaeBacillusBacillus cereus group
ProteomesiUP000001233: Chromosome, UP000010109: Chromosome

Structurei

3D structure databases

ProteinModelPortaliC3CLI3.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Phylogenomic databases

KOiK01176.

Family and domain databases

Gene3Di2.60.40.1180. 1 hit.
3.20.20.80. 1 hit.
InterProiIPR013776. A-amylase_thermo.
IPR015237. Alpha-amylase_C_pro.
IPR015902. Glyco_hydro_13.
IPR013780. Glyco_hydro_13_b.
IPR006047. Glyco_hydro_13_cat_dom.
IPR006589. Glyco_hydro_13_sub_cat_dom.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view]
PANTHERiPTHR10357. PTHR10357. 1 hit.
PfamiPF00128. Alpha-amylase. 1 hit.
PF09154. DUF1939. 1 hit.
[Graphical view]
PIRSFiPIRSF001021. Alph-amls_thrmst. 1 hit.
SMARTiSM00642. Aamy. 1 hit.
[Graphical view]
SUPFAMiSSF51445. SSF51445. 1 hit.

Sequencei

Sequence statusi: Complete.

C3CLI3-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MFKRITIVGL SVVLFLPSIY GESKAYADTV NNGTLMQYFE WYAPNDGDHW
60 70 80 90 100
NRLRTDAENL AQKGITSVWI PPAYKGTTQN DVGYGAYDLY DLGEFNQKGT
110 120 130 140 150
VRTKYGTKAQ LKSAIDALHK KNIDVYGDVV MNHKGGADYT ETVTAVEVDP
160 170 180 190 200
SNRNVEVSGD YEISAWTGFN FPGRGDSYSN FKWKWYHFDG TDWDEGKKLN
210 220 230 240 250
RIYKFRGIGK AWDWEVSSEN GNYDYLMYAD LDFDHPDVAN EMKKWGTWYA
260 270 280 290 300
KELNLDGFRL DAVKHIDHEY LRDWVNHVRQ QTGKEMFTVA EYWQNDIQTL
310 320 330 340 350
NNYLAKVNYN QSVFDAPLHY NFHYASTGNG NYDMRNILKG TVVANHPTLA
360 370 380 390 400
VTLVENHDSQ PGQSLESVVS PWFKPLAYAF ILTRAEGYPS VFYGDYYGTK
410 420 430 440 450
GNSNYEIPAL KDKIDPILTA RKNFAYGTQR DYFDHPDVIG WTREGDSVHA
460 470 480 490 500
NSGLATLISD GPGGSKWMDV GKNNAGEVWY DITGNQTNTV TINKDGWGQF
510
QVSGGSVSIY VQQ
Length:513
Mass (Da):58,262
Last modified:June 16, 2009 - v1
Checksum:iF7A35CCE013547FE
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP003889 Genomic DNA. Translation: AFV19232.1.
ACMZ01000087 Genomic DNA. Translation: EEM27949.1.
RefSeqiYP_006928169.1. NC_018877.1.

Genome annotation databases

EnsemblBacteriaiAFV19232; AFV19232; BTB_c35500.
EEM27949; EEM27949; bthur0002_32030.
GeneIDi13850620.
KEGGibtg:BTB_c35500.
PATRICi26095808. VBIBacThu117809_5613.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP003889 Genomic DNA. Translation: AFV19232.1.
ACMZ01000087 Genomic DNA. Translation: EEM27949.1.
RefSeqiYP_006928169.1. NC_018877.1.

3D structure databases

ProteinModelPortaliC3CLI3.
ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAFV19232; AFV19232; BTB_c35500.
EEM27949; EEM27949; bthur0002_32030.
GeneIDi13850620.
KEGGibtg:BTB_c35500.
PATRICi26095808. VBIBacThu117809_5613.

Phylogenomic databases

KOiK01176.

Family and domain databases

Gene3Di2.60.40.1180. 1 hit.
3.20.20.80. 1 hit.
InterProiIPR013776. A-amylase_thermo.
IPR015237. Alpha-amylase_C_pro.
IPR015902. Glyco_hydro_13.
IPR013780. Glyco_hydro_13_b.
IPR006047. Glyco_hydro_13_cat_dom.
IPR006589. Glyco_hydro_13_sub_cat_dom.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view]
PANTHERiPTHR10357. PTHR10357. 1 hit.
PfamiPF00128. Alpha-amylase. 1 hit.
PF09154. DUF1939. 1 hit.
[Graphical view]
PIRSFiPIRSF001021. Alph-amls_thrmst. 1 hit.
SMARTiSM00642. Aamy. 1 hit.
[Graphical view]
SUPFAMiSSF51445. SSF51445. 1 hit.
ProtoNetiSearch...

Publicationsi

« Hide 'large scale' publications
  1. "Genomic characterization of the Bacillus cereus sensu lato species: Backdrop to the evolution of Bacillus anthracis."
    Zwick M.E., Joseph S.J., Didelot X., Chen P.E., Bishop-Lilly K.A., Stewart A.C., Willner K., Nolan N., Lentz S., Thomason M.K., Sozhamannan S., Mateczun A.J., Du L., Read T.D.
    Genome Res. 22:1512-1524(2012) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE.
    Strain: Bt407Imported.
  2. "Complete Genome Sequence of Bacillus thuringiensis Strain 407 Cry-."
    Sheppard A.E., Poehlein A., Rosenstiel P., Liesegang H., Schulenburg H.
    Genome Announc. 1:E00158-12(2013) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Entry informationi

Entry nameiC3CLI3_BACTU
AccessioniPrimary (citable) accession number: C3CLI3
Entry historyi
Integrated into UniProtKB/TrEMBL: June 16, 2009
Last sequence update: June 16, 2009
Last modified: February 4, 2015
This is version 34 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.