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C2LY08 (C2LY08_STAHO) Unreviewed, UniProtKB/TrEMBL

Last modified April 3, 2013. Version 23. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesRecommended name:
Arginine--tRNA ligase HAMAP-Rule MF_00123
EC=6.1.1.19 HAMAP-Rule MF_00123
Alternative name(s):
Arginyl-tRNA synthetase HAMAP-Rule MF_00123
Gene names
Name:argS HAMAP-Rule MF_00123 EMBL EEK12266.1
ORF Names:STAHO0001_1897 EMBL EEK12266.1
OrganismStaphylococcus hominis SK119 EMBL EEK12266.1
Taxonomic identifier629742 [NCBI]
Taxonomic lineageBacteria › Firmicutes › Bacilli › Bacillales › Staphylococcus ›

Protein attributes

Sequence length553 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Catalytic activity

ATP + L-arginine + tRNA(Arg) = AMP + diphosphate + L-arginyl-tRNA(Arg). HAMAP-Rule MF_00123

Subunit structure

Monomer By similarity. HAMAP-Rule MF_00123

Subcellular location

Cytoplasm By similarity HAMAP-Rule MF_00123.

Sequence similarities

Belongs to the class-I aminoacyl-tRNA synthetase family. HAMAP-Rule MF_00123 RuleBase RU003489

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Regions

Motif130 – 14011"HIGH" region By similarity HAMAP-Rule MF_00123

Sequences

Sequence LengthMass (Da)Tools
C2LY08 [UniParc].

Last modified June 16, 2009. Version 1.
Checksum: 415743DB24BEA0F8

FASTA55362,473
        10         20         30         40         50         60 
MNIIEKVKKT LIQEIEASIK KANLAEDIPE IKVEIPKDTK NGDYSTNIAM VLTKIAKRNP 

        70         80         90        100        110        120 
RDIAQAIVDN LDTSKANVKQ VDIAGPGFIN FYLDNQYLTA VISEAIQKGD KFGYAEEPKN 

       130        140        150        160        170        180 
KKILLEYVSA NPTGDLHIGH ARNAAVGDSL ANILIAAGYD VTREYYINDA GNQITNLARS 

       190        200        210        220        230        240 
IETRFFEALG DTSHEMPADG YNGKDIVEIG KDLAKKHPEM KDYSDEERLK TFRQLGVDYE 

       250        260        270        280        290        300 
MDKLKKDLSD FNVHFDNWFS ETSLYENGAI DNTLEKMHEL GYTYEADGAT WLRTSDFKDD 

       310        320        330        340        350        360 
KDRVLIKKDG NYTYFTPDTA YHYNKINRGN DILIDLMGAD HHGYINRLKA SLETFGVDSD 

       370        380        390        400        410        420 
RLEIQIMQMV RLMQNGEEVK MSKRTGNAIT LREIMDEVGI DAARYFLTMR SPDSHFDFDL 

       430        440        450        460        470        480 
ELAKEQSQDN PIYYAQYAHA RICSILKQAK EKGIEIDKNA DFSTITNEKA IDLLKKVAEF 

       490        500        510        520        530        540 
EPTIESAAES RAPHRLTNYI QDLASAFHKF YNAEKVLSDD IEKTKAHVAL IEAVKITLHN 

       550 
ALALVGVSAP ESM

« Hide

References

[1]Sebastian Y., Madupu R., Durkin A.S., Torralba M., Methe B., Sutton G.G., Strausberg R.L., Nelson K.E.
Submitted (APR-2009) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE.
Strain: SK119 EMBL EEK12266.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		ACLP01000011 Genomic DNA. Translation: EEK12266.1.

3D structure databases

ProteinModelPortalC2LY08.
ModBaseSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaEEK12266; EEK12266; STAHO0001_1897.
PATRIC31406407. VBIStaHom49788_0982.

Family and domain databases

Gene3D3.30.1360.70. 1 hit.
3.40.50.620. 1 hit.
HAMAPMF_00123. Arg_tRNA_synth.
InterProIPR001412. aa-tRNA-synth_I_CS.
IPR001278. Arg-tRNA-ligase_Ia.
IPR015945. Arg-tRNA-synth_Ia_core.
IPR005148. Arg-tRNA-synth_N.
IPR008909. DALR_anticod-bd.
IPR014729. Rossmann-like_a/b/a_fold.
IPR009080. tRNAsynth_1a_anticodon-bd.
[Graphical view]
PANTHERPTHR11956. PTHR11956. 1 hit.
PfamPF03485. Arg_tRNA_synt_N. 1 hit.
PF05746. DALR_1. 1 hit.
PF00750. tRNA-synt_1d. 1 hit.
[Graphical view]
PRINTSPR01038. TRNASYNTHARG.
SMARTSM01016. Arg_tRNA_synt_N. 1 hit.
SM00836. DALR_1. 1 hit.
[Graphical view]
SUPFAMSSF55190. Arg-tRNA-synth_Ic_N. 1 hit.
SSF47323. tRNAsyn_1a_bind. 1 hit.
TIGRFAMsTIGR00456. argS. 1 hit.
PROSITEPS00178. AA_TRNA_LIGASE_I. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameC2LY08_STAHO
AccessionPrimary (citable) accession number: C2LY08
Entry history
Integrated into UniProtKB/TrEMBL: June 16, 2009
Last sequence update: June 16, 2009
Last modified: April 3, 2013
This is version 23 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
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