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Protein
Submitted name:

Cytochrome f

Gene

petA

Organism
Potamogeton pusillus
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein inferred from homologyi

Functioni

GO - Molecular functioni

  1. electron carrier activity Source: InterPro
  2. heme binding Source: InterPro
  3. iron ion binding Source: InterPro

GO - Biological processi

  1. photosynthesis Source: InterPro
Complete GO annotation...

Names & Taxonomyi

Protein namesi
Submitted name:
Cytochrome fImported
Gene namesi
Name:petAImported
Encoded oniPlastid; ChloroplastImported
OrganismiPotamogeton pusillusImported
Taxonomic identifieri246702 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaLiliopsidaPotamogetonaceaePotamogeton

Subcellular locationi

GO - Cellular componenti

  1. chloroplast Source: UniProtKB-KW
  2. integral component of thylakoid membrane Source: InterPro
Complete GO annotation...

Keywords - Cellular componenti

ChloroplastImported, Plastid

Family & Domainsi

Family and domain databases

Gene3Di1.20.5.700. 1 hit.
2.60.40.830. 2 hits.
HAMAPiMF_00610. Cytb6_f_cytF.
InterProiIPR024058. Cyt-f_TM.
IPR002325. Cyt_f.
IPR024094. Cyt_f_lg_dom.
IPR011054. Rudment_hybrid_motif.
[Graphical view]
PfamiPF01333. Apocytochr_F_C. 1 hit.
[Graphical view]
PRINTSiPR00610. CYTOCHROMEF.
SUPFAMiSSF103431. SSF103431. 1 hit.
SSF49441. SSF49441. 2 hits.
SSF51246. SSF51246. 1 hit.
PROSITEiPS51010. CYTF. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Fragment.

C1PGE4-1 [UniParc]FASTAAdd to Basket

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        10         20         30         40         50
MQNRNTFFVV REQITRSISV SIMIYIITHT SISNAYPIFA QQGYENPREA
60 70 80 90 100
TGRIVCANCH LANKPVDIEV PQAVLPDTVF EAVVRIPYDR QVKQVLANGK
110 120 130 140 150
KGGLNVGAVL ILPEGFELAP PDRISPEMKE KMGNLSFQSY RPTKKNILVI
160 170 180 190 200
GPVPGQKYSE IVFPILSPDP TMKKDVHFLK YPIYVGGNRG RGQIYPDGSK
210 220 230 240 250
SNNTVYNATS AGIVSKIVRK QKGGYEITIA DASDGHEVVD MIPPGPELLV
260 270 280 290 300
SEGESIKLDQ PLTSNPNVGG FGQGDAEIVL QDPLRVQGLL FFFASIILAQ

IFLVLK
Length:306
Mass (Da):33,580
Last modified:June 16, 2009 - v1
Checksum:iBA1280D667D4D719
GO

Experimental Info

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Non-terminal residuei306 – 3061Imported

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AB250142 Genomic DNA. Translation: BAH57941.1.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AB250142 Genomic DNA. Translation: BAH57941.1.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Family and domain databases

Gene3Di1.20.5.700. 1 hit.
2.60.40.830. 2 hits.
HAMAPiMF_00610. Cytb6_f_cytF.
InterProiIPR024058. Cyt-f_TM.
IPR002325. Cyt_f.
IPR024094. Cyt_f_lg_dom.
IPR011054. Rudment_hybrid_motif.
[Graphical view]
PfamiPF01333. Apocytochr_F_C. 1 hit.
[Graphical view]
PRINTSiPR00610. CYTOCHROMEF.
SUPFAMiSSF103431. SSF103431. 1 hit.
SSF49441. SSF49441. 2 hits.
SSF51246. SSF51246. 1 hit.
PROSITEiPS51010. CYTF. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. "Molecular adaptation of rbcL in the heterophyllous aquatic plant Potamogeton."
    Iida S., Miyagi A., Aoki S., Ito M., Kadono Y., Kosuge K.
    PLoS ONE 4:e4633-e4633(2009) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE.

Entry informationi

Entry nameiC1PGE4_9LILI
AccessioniPrimary (citable) accession number: C1PGE4
Entry historyi
Integrated into UniProtKB/TrEMBL: June 16, 2009
Last sequence update: June 16, 2009
Last modified: October 29, 2014
This is version 21 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.