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Protein

Uncharacterized protein YshB

Gene

yshB

Organism
Escherichia coli (strain K12)
Status
Reviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at protein leveli

Functioni

Enzyme and pathway databases

BioCyciEcoCyc:MONOMER0-2884.

Names & Taxonomyi

Protein namesi
Recommended name:
Uncharacterized protein YshB
Gene namesi
Name:yshB
Ordered Locus Names:b4686, JW3839.1
OrganismiEscherichia coli (strain K12)
Taxonomic identifieri83333 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaEnterobacteralesEnterobacteriaceaeEscherichia
Proteomesi
  • UP000000318 Componenti: Chromosome
  • UP000000625 Componenti: Chromosome

Organism-specific databases

EcoGeneiEG14491. yshB.

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00003819911 – 36Uncharacterized protein YshBAdd BLAST36

Proteomic databases

PaxDbiC1P620.

Expressioni

Inductioni

In stationary phase (at protein level).1 Publication

Interactioni

Protein-protein interaction databases

STRINGi511145.b4686.

Family & Domainsi

Phylogenomic databases

eggNOGiENOG4106FIY. Bacteria.
ENOG410XVNE. LUCA.
HOGENOMiHOG000009653.

Sequencei

Sequence statusi: Complete.

C1P620-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30 
MLESIINLVS SGAVDSHTPQ TAVAAVLCAA MIGLFS
Length:36
Mass (Da):3,618
Last modified:May 26, 2009 - v1
Checksum:iDBB462D33F17D8E8
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U00096 Genomic DNA. Translation: ACO60012.1.
AP009048 Genomic DNA. No translation available.
RefSeqiWP_000893994.1. NZ_LN832404.1.
YP_002791260.1. NC_000913.3.

Genome annotation databases

EnsemblBacteriaiACO60012; ACO60012; b4686.
GeneIDi7751621.
KEGGieco:b4686.
PATRICi32123237. VBIEscCol129921_3979.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U00096 Genomic DNA. Translation: ACO60012.1.
AP009048 Genomic DNA. No translation available.
RefSeqiWP_000893994.1. NZ_LN832404.1.
YP_002791260.1. NC_000913.3.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi511145.b4686.

Proteomic databases

PaxDbiC1P620.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiACO60012; ACO60012; b4686.
GeneIDi7751621.
KEGGieco:b4686.
PATRICi32123237. VBIEscCol129921_3979.

Organism-specific databases

EcoGeneiEG14491. yshB.

Phylogenomic databases

eggNOGiENOG4106FIY. Bacteria.
ENOG410XVNE. LUCA.
HOGENOMiHOG000009653.

Enzyme and pathway databases

BioCyciEcoCyc:MONOMER0-2884.

Miscellaneous databases

PROiC1P620.

Family and domain databases

ProtoNetiSearch...

Entry informationi

Entry nameiYSHB_ECOLI
AccessioniPrimary (citable) accession number: C1P620
Entry historyi
Integrated into UniProtKB/Swiss-Prot: September 1, 2009
Last sequence update: May 26, 2009
Last modified: November 2, 2016
This is version 33 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Escherichia coli
    Escherichia coli (strain K12): entries and cross-references to EcoGene

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.