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C1L1E6 (C1L1E6_LISMC) Unreviewed, UniProtKB/TrEMBL

Last modified May 1, 2013. Version 25. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesSubmitted name:
Putative PTS system, Lichenan-specific enzyme IIC component EMBL CAS04661.1
Gene names
Ordered Locus Names:Lm4b_00894 EMBL CAS04661.1
OrganismListeria monocytogenes serotype 4b (strain CLIP80459) [Complete proteome] [HAMAP] EMBL CAS04661.1
Taxonomic identifier568819 [NCBI]
Taxonomic lineageBacteria › Firmicutes › Bacilli › Bacillales › Listeriaceae › Listeria ›

Protein attributes

Sequence length441 AA.
Sequence statusComplete.
Protein existencePredicted

Sequences

Sequence LengthMass (Da)Tools
C1L1E6 [UniParc].

Last modified May 26, 2009. Version 1.
Checksum: 131AD281AF49790B

FASTA44148,449
        10         20         30         40         50         60 
MSSKNKQSFM NRFIAFMEKY FEPVAARIEK QRHISSIKNG MIALISVLII GSFSLIISAI 

        70         80         90        100        110        120 
GNMFPAGSVV KEFFVQNAAA LNLPFQFTFG LLSIYAAITI SYSHAKQMKV PVLHSVMAAV 

       130        140        150        160        170        180 
MVTLILNTKM VDGVLNTEFL DSRGLFIAIF AALISVELIG LFIRKNITIR IKGLPAGIAT 

       190        200        210        220        230        240 
TFEAIIPLVV LLFSAVGLSI LMQSVTSGQI IPEAFTTMLA PAINSIDTPY AVFLICFLEM 

       250        260        270        280        290        300 
LFWFIGLNGY AILIGFVLPF MTQYLGANAA AYAAGEPIPH VFAPNFWDYF MGFSGSGITG 

       310        320        330        340        350        360 
ALVILALFSK SRELKAVGKV SVVPAIFTIS EPVVFGLPIC FNPYLFIPFV LGTPILAVGQ 

       370        380        390        400        410        420 
WFVFHFGWVR PPIANVGGTP IPLAQYLATM DWRAIILIIF VLAAAVCMYY PFFKMYEKSL 

       430        440 
IKEEEVVSER QAAHDALDLD F

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References

[1]"Comparative genomics and transcriptomics of lineages I, II, and III strains of Listeria monocytogenes."
Hain T., Ghai R., Billion A., Kuenne C.T., Steinweg C., Izar B., Mohamed W., Mraheil M., Domann E., Schaffrath S., Karst U., Goesmann A., Oehm S., Puhler A., Merkl R., Vorwerk S., Glaser P., Garrido P. expand/collapse author list , Rusniok C., Buchrieser C., Goebel W., Chakraborty T.
BMC Genomics 13:144-144(2012) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: CLIP80459.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		FM242711 Genomic DNA. Translation: CAS04661.1.
RefSeqYP_002757602.1. NC_012488.1.

3D structure databases

ModBaseSearch...

Protein-protein interaction databases

STRING634178.Lm4b_00894.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaCAS04661; CAS04661; Lm4b_00894.
GeneID7704479.
KEGGlmc:Lm4b_00894.
PATRIC20304919. VBILisMon88360_0893.

Organism-specific databases

CMRSearch...

Phylogenomic databases

HOGENOMHOG000224102.
KOK02761.
OMAAITSSIW.
ProtClustDBCLSK629113.

Enzyme and pathway databases

BioCycLMON568819:GJF9-1344-MONOMER.

Family and domain databases

InterProIPR003352. PTS_EIIC.
IPR004796. PTS_IIC_cello.
IPR004501. PTS_IIC_lac.
[Graphical view]
PfamPF02378. PTS_EIIC. 1 hit.
[Graphical view]
PIRSFPIRSF006351. PTS_EIIC-Cellobiose. 1 hit.
TIGRFAMsTIGR00410. lacE. 1 hit.
PROSITEPS51105. PTS_EIIC_TYPE_3. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameC1L1E6_LISMC
AccessionPrimary (citable) accession number: C1L1E6
Entry history
Integrated into UniProtKB/TrEMBL: May 26, 2009
Last sequence update: May 26, 2009
Last modified: May 1, 2013
This is version 25 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
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