C1KZM8 (C1KZM8_LISMC) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Putative ribose 5-phosphate epimerase EMBL CAS06401.1

Gene names

Ordered Locus Names:

Lm4b_02647 EMBL CAS06401.1

Organism

Listeria monocytogenes serotype 4b (strain CLIP80459) [Complete proteome] [HAMAP] EMBL CAS06401.1

Taxonomic identifier

568819 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Firmicutes › Bacilli › Bacillales › Listeriaceae › Listeria › Listeria monocytogenes

Protein attributes

Sequence length	151 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Technical term	Complete proteome
Gene Ontology (GO)
Biological_process	pentose-phosphate shunt Inferred from electronic annotation. Source: InterPro
Molecular_function	ribose-5-phosphate isomerase activity Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	C1KZM8 [UniParc]. Last modified May 26, 2009. Version 1. Checksum: 0AFE6772B0FE371A	FASTA	151	15,985
	10 20 30 40 50 60 MTVSKVAIAS DHGGIELRKS IISYLESVGI SYEEFGPEAP ESVDYPGLAI TVSEKVVNQE 70 80 90 100 110 120 VDRGILVCGT GIGMSIAANK VKGIRCALVG DTFSAHATRE HNDTNVLALG ARVIGPGLAE 130 140 150 DIVKIWLETA YEGGRHANRV GQITAYEDSQ A

References

[1]

"Comparative genomics and transcriptomics of lineages I, II, and III strains of Listeria monocytogenes." Hain T., Ghai R., Billion A., Kuenne C.T., Steinweg C., Izar B., Mohamed W., Mraheil M., Domann E., Schaffrath S., Karst U., Goesmann A., Oehm S., Puhler A., Merkl R., Vorwerk S., Glaser P., Garrido P. , Rusniok C., Buchrieser C., Goebel W., Chakraborty T. BMC Genomics 13:144-144(2012) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: CLIP80459.

Cross-references

Sequence databases
EMBL GenBank DDBJ	FM242711 Genomic DNA. Translation: CAS06401.1.
RefSeq	YP_002759332.1. NC_012488.1.
3D structure databases
ProteinModelPortal	C1KZM8.
ModBase	Search...
Protein-protein interaction databases
STRING	634178.Lm4b_02647.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	CAS06401; CAS06401; Lm4b_02647.
GeneID	7702781.
KEGG	lmc:Lm4b_02647.
PATRIC	20308629. VBILisMon88360_2679.
Organism-specific databases
CMR	Search...
Phylogenomic databases
HOGENOM	HOG000226301.
KO	K01808.
OMA	CETSVDY.
ProtClustDB	PRK05571.
Family and domain databases
Gene3D	3.40.1400.10. 1 hit.
InterPro	IPR003500. Rib/Gal_isomrase. IPR004785. RpiB. [Graphical view]
PANTHER	PTHR30345. PTHR30345. 1 hit.
Pfam	PF02502. LacAB_rpiB. 1 hit. [Graphical view]
PIRSF	PIRSF005384. RpiB_LacA_B. 1 hit.
SUPFAM	SSF89623. Rib/Gal_isomrase. 1 hit.
TIGRFAMs	TIGR01120. rpiB. 1 hit. TIGR00689. rpiB_lacA_lacB. 1 hit.
ProtoNet	Search...

Entry information

Entry name

C1KZM8_LISMC

Accession

Primary (citable) accession number: C1KZM8

Entry history

Integrated into UniProtKB/TrEMBL:	May 26, 2009
Last sequence update:	May 26, 2009
Last modified:	May 1, 2013
This is version 25 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)