C1KY72 (C1KY72_LISMC) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Putative glutamate decarboxylase EMBL CAS06157.1

Gene names

Ordered Locus Names:

Lm4b_02402 EMBL CAS06157.1

Organism

Listeria monocytogenes serotype 4b (strain CLIP80459) [Complete proteome] [HAMAP] EMBL CAS06157.1

Taxonomic identifier

568819 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Firmicutes › Bacilli › Bacillales › Listeriaceae › Listeria › Listeria monocytogenes

Protein attributes

Sequence length	467 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Cofactor	Pyridoxal phosphate By similarity. RuleBase RU000382
Sequence similarities	Belongs to the group II decarboxylase family. RuleBase RU000382

Ontologies

Keywords
Ligand	Pyridoxal phosphate RuleBase RU000382
Molecular function	Lyase RuleBase RU000382
Technical term	Complete proteome
Gene Ontology (GO)
Biological_process	glutamate metabolic process Inferred from electronic annotation. Source: InterPro
Molecular_function	glutamate decarboxylase activity Inferred from electronic annotation. Source: InterPro pyridoxal phosphate binding Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	C1KY72 [UniParc]. Last modified May 26, 2009. Version 1. Checksum: C6DBC24F9CF06496	FASTA	467	53,662
	10 20 30 40 50 60 MLYSEDDKRK QESYRIPLFG SEEESTSIPK YVLKKEPMEP RIAYQLVKDQ LMDEGNARQN 70 80 90 100 110 120 LATFCQTYME KEAEILMAET LEKNAIDKSE YPQTAELENR CVNILADLWN APKDMSYLGT 130 140 150 160 170 180 STVGSSEACM LGGLAMKFRW RNHAEKRGLD IQAKRPNLII SSGYQVCWEK FCVYWDVDMR 190 200 210 220 230 240 VVPMDKEHLS IDVDKVFDLV DEYTIGIVGI LGITYTGKFD DIQLLDEKVE AYNEANEHQL 250 260 270 280 290 300 VIHVDGASGA MFTPFVNPEL PWDFRLKNVV SINTSGHKYG LVYPGVGWIL WKDKEYLPKE 310 320 330 340 350 360 LIFEVSYLGG SMPTMAINFS RSASQIIGQY YNFLRYGFEG YREIHEKTKK TALYLAKSVE 370 380 390 400 410 420 KSGYFEIIND GANLPIVCYK MKEGLDVEWT LYDLADQLLM KGWQVPAYPL PADLSDTIIQ 430 440 450 460 RFVCRADLGY NVAEEFAVDF ADALHNLEHA RVLYHDKERN DSYGFTH

References

[1]

"Comparative genomics and transcriptomics of lineages I, II, and III strains of Listeria monocytogenes." Hain T., Ghai R., Billion A., Kuenne C.T., Steinweg C., Izar B., Mohamed W., Mraheil M., Domann E., Schaffrath S., Karst U., Goesmann A., Oehm S., Puhler A., Merkl R., Vorwerk S., Glaser P., Garrido P. , Rusniok C., Buchrieser C., Goebel W., Chakraborty T. BMC Genomics 13:144-144(2012) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: CLIP80459.

Cross-references

Sequence databases
EMBL GenBank DDBJ	FM242711 Genomic DNA. Translation: CAS06157.1.
RefSeq	YP_002759088.1. NC_012488.1.
3D structure databases
ProteinModelPortal	C1KY72.
ModBase	Search...
Protein-protein interaction databases
STRING	634178.Lm4b_02402.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	CAS06157; CAS06157; Lm4b_02402.
GeneID	7701830.
KEGG	lmc:Lm4b_02402.
PATRIC	20308109. VBILisMon88360_2427.
Organism-specific databases
CMR	Search...
Phylogenomic databases
HOGENOM	HOG000070228.
KO	K01580.
OMA	FRWRNNA.
ProtClustDB	CLSK876864.
Family and domain databases
Gene3D	3.40.640.10. 1 hit.
InterPro	IPR010107. Glutamate_decarboxylase. IPR002129. PyrdxlP-dep_de-COase. IPR015424. PyrdxlP-dep_Trfase. IPR015421. PyrdxlP-dep_Trfase_major_sub1. [Graphical view]
PANTHER	PTHR11999:SF1. PTHR11999:SF1. 1 hit.
Pfam	PF00282. Pyridoxal_deC. 1 hit. [Graphical view]
SUPFAM	SSF53383. PyrdxlP-dep_Trfase_major. 1 hit.
TIGRFAMs	TIGR01788. Glu-decarb-GAD. 1 hit.
ProtoNet	Search...

Entry information

Entry name

C1KY72_LISMC

Accession

Primary (citable) accession number: C1KY72

Entry history

Integrated into UniProtKB/TrEMBL:	May 26, 2009
Last sequence update:	May 26, 2009
Last modified:	May 1, 2013
This is version 29 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)