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C1KXS9 (C1KXS9_LISMC) Unreviewed, UniProtKB/TrEMBL

Last modified December 14, 2011. Version 22. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesSubmitted name:
Putative chitinase B EMBL CAS03900.1
Gene names
Ordered Locus Names:Lm4b_00109
OrganismListeria monocytogenes serotype 4b (strain Clip81459) [Complete proteome] [HAMAP]
Taxonomic identifier568819 [NCBI]
Taxonomic lineageBacteria › Firmicutes › Bacillales › Listeriaceae › Listeria

Protein attributes

Sequence length756 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Sequence similarities

Belongs to the glycosyl hydrolase 18 family. RuleBase RU004453

Contains 1 fibronectin type-III domain. RuleBase RU000718

Ontologies

Keywords
   Technical termComplete proteome
Gene Ontology (GO)
   Biological processchitin catabolic process

Inferred from electronic annotation. Source: InterPro

   Cellular componentextracellular region

Inferred from electronic annotation. Source: InterPro

   Molecular functioncarbohydrate binding

Inferred from electronic annotation. Source: InterPro

cation binding

Inferred from electronic annotation. Source: InterPro

chitinase activity

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
C1KXS9 [UniParc].

Last modified May 26, 2009. Version 1.
Checksum: AB00CDB67A80A6F2

FASTA75681,553
        10         20         30         40         50         60 
MKKLFSITSV VLLVLSLVVV SIGAEPKRAK AAENVPQYRN VMYYGDWSIW GGEGNFYPKD 

        70         80         90        100        110        120 
IPADQLTHLN FAFLDFNSNG DLVFTDKDAA VGAPVGQEGV QWGGANAGVL NAIQDLRAQN 

       130        140        150        160        170        180 
PNLKIGVSVG GWSKSGDFST VAADPTKRAN FVKNVMKFVK YTNMDFVDLD WEYPASVRDA 

       190        200        210        220        230        240 
DLVDNKNDEG TPNAKPADKQ NFITLLQDLR TALDKQGVDI NKKYELSVAL PAAKSTLENG 

       250        260        270        280        290        300 
IDVANLFKVV DFANVMTYDL NGAWTPNSAH HTALYGNPKD PNYDSGFSVD QTVKYLKEKG 

       310        320        330        340        350        360 
AVSNKIVVGA AFYTRGWNKV AAGTDTALPG LFQAAEKTNK DADGSLTYGA NNENPIKTGD 

       370        380        390        400        410        420 
GGRAGGVWAY RSIDALKAKT PTLKEYWDDT AKAPYLYSKE TGEFYTYDNT RSIGYKAQYV 

       430        440        450        460        470        480 
KDNNLGGMIS WMQSQDKTTT STKRDELTKA IKSGLFGTNA IPQNAITYAN LNVVATVKPY 

       490        500        510        520        530        540 
SENGVGYEIT ITNNEKADET NEVLKSTELS FETVKLPKFY IPVKAGETLT AGDYKAGTVT 

       550        560        570        580        590        600 
TSGGNTVVDL ASVYDAQQIP QGASYTFRLK SSASSVDVAN ISKIDLTQRM VKSSVEFGKQ 

       610        620        630        640        650        660 
TIFGGGTVVP DPSDTEAPTV PKALASSNVT DKSATLTWTA STDNKAVAGY KVYRNGTEVG 

       670        680        690        700        710        720 
SVSGTTFTDS GLTAKTAYSY TVKAYDAAGN FSAASSVLTV TTLDAATPPA TPAWDAAKTY 

       730        740        750 
NKGDRVSYKG KTYEAQWWTQ GNEPGAEQWG PWLLIN

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References

[1]"Complete genome sequence of Listeria monocytogenes serotype 4b strain Clip81459."
Rusniok C.
Submitted (OCT-2008) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		FM242711 Genomic DNA. Translation: CAS03900.1.
RefSeqYP_002756851.1. NC_012488.1.

3D structure databases

ModBaseSearch...

Protein-protein interaction databases

STRINGC1KXS9.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID7701749.
GenomeReviewsGene locus Lm4b_00109 in contig FM242711_GR.
KEGGlmc:Lm4b_00109.
PATRIC20303327. VBILisMon88360_0115.

Organism-specific databases

CMRSearch...

Phylogenomic databases

OMAYGANNEN.
ProtClustDBCLSK563779.

Family and domain databases

InterProIPR003610. CBM_fam5/12.
IPR011583. Chitinase_II.
IPR003961. Fibronectin_type3.
IPR001223. Glyco_hydro18cat.
IPR013781. Glyco_hydro_subgr_catalytic.
IPR017853. Glycoside_hydrolase_SF.
IPR013783. Ig-like_fold.
[Graphical view]
Gene3DG3DSA:2.10.10.20. G3DSA:2.10.10.20. 1 hit.
G3DSA:3.20.20.80. Glyco_hydro_cat. 2 hits.
G3DSA:2.60.40.10. Ig-like_fold. 1 hit.
KOK01183.
PfamPF02839. CBM_5_12. 1 hit.
PF00041. fn3. 1 hit.
PF00704. Glyco_hydro_18. 1 hit.
[Graphical view]
SMARTSM00495. ChtBD3. 1 hit.
SM00060. FN3. 1 hit.
SM00636. Glyco_18. 1 hit.
[Graphical view]
SUPFAMSSF51055. CBM_5_12. 1 hit.
SSF49265. FN_III-like. 1 hit.
SSF51445. Glyco_hydro_cat. 1 hit.
PROSITEPS50853. FN3. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameC1KXS9_LISMC
AccessionPrimary (citable) accession number: C1KXS9
Entry history
Integrated into UniProtKB/TrEMBL: May 26, 2009
Last sequence update: May 26, 2009
Last modified: December 14, 2011
This is version 22 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
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