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C1KWF5

- DEOD_LISMC

UniProt

C1KWF5 - DEOD_LISMC

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Protein

Purine nucleoside phosphorylase DeoD-type

Gene

deoD

Organism
Listeria monocytogenes serotype 4b (strain CLIP80459)
Status
Reviewed - Annotation score: 2 out of 5- Protein inferred from homologyi

Functioni

Catalytic activityi

Purine nucleoside + phosphate = purine + alpha-D-ribose 1-phosphate.UniRule annotation
Purine deoxynucleoside + phosphate = purine + 2'-deoxy-alpha-D-ribose 1-phosphate.UniRule annotation

GO - Molecular functioni

  1. purine-nucleoside phosphorylase activity Source: UniProtKB-HAMAP

GO - Biological processi

  1. purine nucleoside metabolic process Source: UniProtKB-HAMAP
Complete GO annotation...

Keywords - Molecular functioni

Glycosyltransferase, Transferase

Enzyme and pathway databases

BioCyciLMON568819:GJF9-2780-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
Purine nucleoside phosphorylase DeoD-typeUniRule annotation (EC:2.4.2.1UniRule annotation)
Short name:
PNPUniRule annotation
Gene namesi
Name:deoDUniRule annotation
Ordered Locus Names:Lm4b_01872
OrganismiListeria monocytogenes serotype 4b (strain CLIP80459)
Taxonomic identifieri568819 [NCBI]
Taxonomic lineageiBacteriaFirmicutesBacilliBacillalesListeriaceaeListeria
ProteomesiUP000002203: Chromosome

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 233233Purine nucleoside phosphorylase DeoD-typePRO_1000215752Add
BLAST

Interactioni

Subunit structurei

Homohexamer.UniRule annotation

Protein-protein interaction databases

STRINGi634178.Lm4b_01872.

Structurei

3D structure databases

ProteinModelPortaliC1KWF5.
SMRiC1KWF5. Positions 1-233.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the PNP/UDP phosphorylase family.UniRule annotation

Phylogenomic databases

HOGENOMiHOG000274896.
KOiK03784.
OMAiECYNEVR.
OrthoDBiEOG6BKJC5.

Family and domain databases

Gene3Di3.40.50.1580. 1 hit.
HAMAPiMF_01627. Pur_nucleosid_phosp.
InterProiIPR004402. DeoD-type.
IPR018017. Nucleoside_phosphorylase.
IPR018016. Nucleoside_phosphorylase_CS.
IPR000845. Nucleoside_phosphorylase_d.
[Graphical view]
PANTHERiPTHR21234. PTHR21234. 1 hit.
PfamiPF01048. PNP_UDP_1. 1 hit.
[Graphical view]
SUPFAMiSSF53167. SSF53167. 1 hit.
TIGRFAMsiTIGR00107. deoD. 1 hit.
PROSITEiPS01232. PNP_UDP_1. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

C1KWF5-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MSVHIEAKQG EIAETILLPG DPLRAKYIAE TFLEDVVLFN QVRGMLGFTG
60 70 80 90 100
TYKGEKVSVM GTGMGIPSIS IYVNELIQSY DVKNLIRVGT MGGIQADVKV
110 120 130 140 150
RDVVIAQAAS TDSQINRNTF AGVDFAPVAD FSLLKKAYDA GIEKGLSLKV
160 170 180 190 200
GNVFSADRFY NDQLDKQQLA DYGVLGIEME AAALYTLAQK YGRRALAILT
210 220 230
VSDHIFTGEE TSAEERQTTF NDMIVVALEA AIK
Length:233
Mass (Da):25,357
Last modified:May 26, 2009 - v1
Checksum:i0B0CB1E06C364A12
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
FM242711 Genomic DNA. Translation: CAS05630.1.
RefSeqiYP_002758566.1. NC_012488.1.

Genome annotation databases

EnsemblBacteriaiCAS05630; CAS05630; Lm4b_01872.
GeneIDi7702974.
KEGGilmc:Lm4b_01872.
PATRICi20306975. VBILisMon88360_1886.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
FM242711 Genomic DNA. Translation: CAS05630.1 .
RefSeqi YP_002758566.1. NC_012488.1.

3D structure databases

ProteinModelPortali C1KWF5.
SMRi C1KWF5. Positions 1-233.
ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

STRINGi 634178.Lm4b_01872.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai CAS05630 ; CAS05630 ; Lm4b_01872 .
GeneIDi 7702974.
KEGGi lmc:Lm4b_01872.
PATRICi 20306975. VBILisMon88360_1886.

Phylogenomic databases

HOGENOMi HOG000274896.
KOi K03784.
OMAi ECYNEVR.
OrthoDBi EOG6BKJC5.

Enzyme and pathway databases

BioCyci LMON568819:GJF9-2780-MONOMER.

Family and domain databases

Gene3Di 3.40.50.1580. 1 hit.
HAMAPi MF_01627. Pur_nucleosid_phosp.
InterProi IPR004402. DeoD-type.
IPR018017. Nucleoside_phosphorylase.
IPR018016. Nucleoside_phosphorylase_CS.
IPR000845. Nucleoside_phosphorylase_d.
[Graphical view ]
PANTHERi PTHR21234. PTHR21234. 1 hit.
Pfami PF01048. PNP_UDP_1. 1 hit.
[Graphical view ]
SUPFAMi SSF53167. SSF53167. 1 hit.
TIGRFAMsi TIGR00107. deoD. 1 hit.
PROSITEi PS01232. PNP_UDP_1. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: CLIP80459.

Entry informationi

Entry nameiDEOD_LISMC
AccessioniPrimary (citable) accession number: C1KWF5
Entry historyi
Integrated into UniProtKB/Swiss-Prot: September 22, 2009
Last sequence update: May 26, 2009
Last modified: October 1, 2014
This is version 36 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome

Documents

  1. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3