C1KWD0 (C1KWD0_LISMC) Unreviewed, UniProtKB/TrEMBL
Last modified
December 14, 2011.
Version 23.
History...
Names·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry infoCustomize order
Names·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry infoCustomize orderNames and origin
| Protein names | Recommended name: Orotate phosphoribosyltransferase HAMAP MF_01208 Short name=OPRT HAMAP MF_01208 Short name=OPRTase HAMAP MF_01208 EC=2.4.2.10 HAMAP MF_01208 | ||||
| Gene names |
| ||||
| Organism | Listeria monocytogenes serotype 4b (strain Clip81459) [Complete proteome] [HAMAP] | ||||
| Taxonomic identifier | 568819 [NCBI] | ||||
| Taxonomic lineage | Bacteria › Firmicutes › Bacillales › Listeriaceae › Listeria |
Protein attributes
| Sequence length | 209 AA. |
| Sequence status | Complete. |
| Protein existence | Inferred from homology |
General annotation (Comments)
| Function | Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP) By similarity. HAMAP MF_01208 SAAS SAAS004467 |
| Catalytic activity | Orotidine 5'-phosphate + diphosphate = orotate + 5-phospho-alpha-D-ribose 1-diphosphate. HAMAP MF_01208 SAAS SAAS023031 |
| Cofactor | Magnesium By similarity. HAMAP MF_01208 |
| Pathway | Pyrimidine metabolism; UMP biosynthesis via de novo pathway; UMP from orotate: step 1/2. HAMAP MF_01208 SAAS SAAS023031 |
| Subunit structure | Homodimer By similarity. HAMAP MF_01208 SAAS SAAS004467 |
| Sequence similarities | Belongs to the purine/pyrimidine phosphoribosyltransferase family. PyrE subfamily. HAMAP MF_01208 |
Ontologies
| Keywords | |
|---|---|
| Biological process | Pyrimidine biosynthesis HAMAP MF_01208 SAAS SAAS023031 |
| Ligand | Magnesium HAMAP MF_01208 |
| Molecular function | Glycosyltransferase SAAS SAAS023031 HAMAP MF_01208 EMBL CAS05605.1 Transferase |
| Technical term | Complete proteome |
| Gene Ontology (GO) | |
| Biological process | nucleoside metabolic process Inferred from electronic annotation. Source: InterPro pyrimidine nucleotide biosynthetic processInferred from electronic annotation. Source: HAMAP |
| Molecular function | magnesium ion binding Inferred from electronic annotation. Source: HAMAP orotate phosphoribosyltransferase activityInferred from electronic annotation. Source: HAMAP |
| Complete GO annotation... | |
Sequence annotation (Features)
| Feature key | Position(s) | Length | Description | Graphical view | Feature identifier | ||||
Regions | |||||||||
|---|---|---|---|---|---|---|---|---|---|
| Region | 122 – 130 | 9 | 5-phosphoribose 1-diphosphate binding By similarity HAMAP MF_01208 | ||||||
Sites | |||||||||
| Binding site | 96 | 1 | 5-phosphoribose 1-diphosphate; shared with dimeric partner By similarity HAMAP MF_01208 | ||||||
| Binding site | 100 | 1 | 5-phosphoribose 1-diphosphate; shared with dimeric partner By similarity HAMAP MF_01208 | ||||||
| Binding site | 102 | 1 | 5-phosphoribose 1-diphosphate; shared with dimeric partner By similarity HAMAP MF_01208 | ||||||
| Binding site | 126 | 1 | Orotate By similarity HAMAP MF_01208 | ||||||
Sequences
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References
| [1] | "Complete genome sequence of Listeria monocytogenes serotype 4b strain Clip81459." Rusniok C. Submitted (OCT-2008) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. |
Cross-references
Sequence databases | |
|---|---|
| EMBL GenBank DDBJ | FM242711 Genomic DNA. Translation: CAS05605.1. |
| RefSeq | YP_002758541.1. NC_012488.1. |
3D structure databases | |
| ProteinModelPortal | C1KWD0. |
| SMR | C1KWD0. Positions 1-208. |
| ModBase | Search... |
Protein-protein interaction databases | |
| STRING | C1KWD0. |
Protocols and materials databases | |
| StructuralBiologyKnowledgebase | Search... |
Genome annotation databases | |
| GeneID | 7702635. |
| GenomeReviews | Gene locus Lm4b_01847 in contig FM242711_GR. |
| KEGG | lmc:Lm4b_01847. |
| PATRIC | 20306925. VBILisMon88360_1861. |
Organism-specific databases | |
| CMR | Search... |
Phylogenomic databases | |
| OMA | LPMTYVR. |
| ProtClustDB | PRK00455. |
Family and domain databases | |
| HAMAP | MF_01208. PyrE. [Tree] |
| InterPro | IPR004467. Or_phspho_trans_clade-1. IPR023031. Orotate_PribosylTferase. IPR000836. PRibTrfase. [Graphical view] |
| KO | K00762. |
| Pfam | PF00156. Pribosyltran. 1 hit. [Graphical view] |
| TIGRFAMs | TIGR00336. PyrE. 1 hit. |
| ProtoNet | Search... |
Entry information
| Entry name | C1KWD0_LISMC | ||||||||
| Accession | Primary (citable) accession number: C1KWD0 | ||||||||
| Entry history |
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| Entry status | Unreviewed (UniProtKB/TrEMBL) | ||||||||

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