Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.
Protein

30S ribosomal protein S20

Gene

rpsT

Organism
Listeria monocytogenes serotype 4b (strain CLIP80459)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

Binds directly to 16S ribosomal RNA.UniRule annotation

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Molecular functioni

Ribonucleoprotein, Ribosomal protein

Keywords - Ligandi

RNA-binding, rRNA-binding

Names & Taxonomyi

Protein namesi
Recommended name:
30S ribosomal protein S20UniRule annotation
Gene namesi
Name:rpsTUniRule annotation
Ordered Locus Names:Lm4b_01490
OrganismiListeria monocytogenes serotype 4b (strain CLIP80459)
Taxonomic identifieri568819 [NCBI]
Taxonomic lineageiBacteriaFirmicutesBacilliBacillalesListeriaceaeListeria

Subcellular locationi

GO - Cellular componenti

Complete GO annotation...

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 848430S ribosomal protein S20PRO_1000206504Add
BLAST

Structurei

3D structure databases

ProteinModelPortaliC1KVC7.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the ribosomal protein S20P family.UniRule annotation

Phylogenomic databases

HOGENOMiHOG000097049.
KOiK02968.
OMAiHACKGLI.

Family and domain databases

Gene3Di1.20.58.110. 1 hit.
HAMAPiMF_00500. Ribosomal_S20. 1 hit.
InterProiIPR002583. Ribosomal_S20.
[Graphical view]
PfamiPF01649. Ribosomal_S20p. 1 hit.
[Graphical view]
ProDomiPD004231. Ribosomal_S20. 1 hit.
[Graphical view] [Entries sharing at least one domain]
SUPFAMiSSF46992. SSF46992. 1 hit.
TIGRFAMsiTIGR00029. S20. 1 hit.

Sequencei

Sequence statusi: Complete.

C1KVC7-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MPNIKSAIKR VKTAETRNSR NASQRSAMRT AIKKFDEAAA NNADNAKDLY
60 70 80
VEASKKLDSA VSKGLIHKNN AARNKSRLAA KLAK
Length:84
Mass (Da):9,169
Last modified:May 26, 2009 - v1
Checksum:i3DFEAED8BF642137
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
FM242711 Genomic DNA. Translation: CAS05252.1.
RefSeqiWP_003726526.1. NC_012488.1.

Genome annotation databases

EnsemblBacteriaiCAS05252; CAS05252; Lm4b_01490.
KEGGilmc:Lm4b_01490.
PATRICi20306149. VBILisMon88360_1501.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
FM242711 Genomic DNA. Translation: CAS05252.1.
RefSeqiWP_003726526.1. NC_012488.1.

3D structure databases

ProteinModelPortaliC1KVC7.
ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiCAS05252; CAS05252; Lm4b_01490.
KEGGilmc:Lm4b_01490.
PATRICi20306149. VBILisMon88360_1501.

Phylogenomic databases

HOGENOMiHOG000097049.
KOiK02968.
OMAiHACKGLI.

Family and domain databases

Gene3Di1.20.58.110. 1 hit.
HAMAPiMF_00500. Ribosomal_S20. 1 hit.
InterProiIPR002583. Ribosomal_S20.
[Graphical view]
PfamiPF01649. Ribosomal_S20p. 1 hit.
[Graphical view]
ProDomiPD004231. Ribosomal_S20. 1 hit.
[Graphical view] [Entries sharing at least one domain]
SUPFAMiSSF46992. SSF46992. 1 hit.
TIGRFAMsiTIGR00029. S20. 1 hit.
ProtoNetiSearch...

Entry informationi

Entry nameiRS20_LISMC
AccessioniPrimary (citable) accession number: C1KVC7
Entry historyi
Integrated into UniProtKB/Swiss-Prot: September 22, 2009
Last sequence update: May 26, 2009
Last modified: September 7, 2016
This is version 42 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Documents

  1. Ribosomal proteins
    Ribosomal proteins families and list of entries
  2. SIMILARITY comments
    Index of protein domains and families

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.