Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.
Basket 0
(max 400 entries)x

Your basket is currently empty.

Select item(s) and click on "Add to basket" to create your own collection here
(400 entries max)

C1H8X1

- C1H8X1_PARBA

UniProt

C1H8X1 - C1H8X1_PARBA

Protein

DNA ligase

Gene

PAAG_07212

Organism
Paracoccidioides lutzii (strain ATCC MYA-826 / Pb01) (Paracoccidioides brasiliensis)
Status
Unreviewed - Annotation score: 2 out of 5- Protein inferred from homologyi
    • BLAST
    • Align
    • Format
    • Add to basket
    • History
      Entry version 34 (01 Oct 2014)
      Sequence version 1 (26 May 2009)
      Previous versions | rss
    • Help video
    • Feedback
    • Comment

    Functioni

    Catalytic activityi

    ATP + (deoxyribonucleotide)(n) + (deoxyribonucleotide)(m) = AMP + diphosphate + (deoxyribonucleotide)(n+m).

    GO - Molecular functioni

    1. ATP binding Source: UniProtKB-KW
    2. DNA binding Source: InterPro
    3. DNA ligase (ATP) activity Source: UniProtKB-EC

    GO - Biological processi

    1. DNA ligation involved in DNA repair Source: InterPro
    2. DNA recombination Source: UniProtKB-KW
    3. DNA replication Source: UniProtKB-KW

    Keywords - Molecular functioni

    LigaseUniRule annotationImported

    Keywords - Biological processi

    DNA damage, DNA recombinationUniRule annotation, DNA repairUniRule annotation, DNA replicationUniRule annotation

    Keywords - Ligandi

    ATP-bindingUniRule annotation, Nucleotide-binding

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    DNA ligaseUniRule annotation (EC:6.5.1.1UniRule annotation)
    Gene namesi
    ORF Names:PAAG_07212Imported
    OrganismiParacoccidioides lutzii (strain ATCC MYA-826 / Pb01) (Paracoccidioides brasiliensis)Imported
    Taxonomic identifieri502779 [NCBI]
    Taxonomic lineageiEukaryotaFungiDikaryaAscomycotaPezizomycotinaEurotiomycetesEurotiomycetidaeOnygenalesmitosporic OnygenalesParacoccidioides
    ProteomesiUP000002059: Unassembled WGS sequence

    Family & Domainsi

    Sequence similaritiesi

    Belongs to the ATP-dependent DNA ligase family.UniRule annotation

    Phylogenomic databases

    KOiK10747.
    OrthoDBiEOG7TXKRG.

    Family and domain databases

    Gene3Di1.10.3260.10. 1 hit.
    2.40.50.140. 1 hit.
    InterProiIPR000977. DNA_ligase_ATP-dep.
    IPR012309. DNA_ligase_ATP-dep_C.
    IPR012310. DNA_ligase_ATP-dep_cent.
    IPR016059. DNA_ligase_ATP-dep_CS.
    IPR012308. DNA_ligase_ATP-dep_N.
    IPR012340. NA-bd_OB-fold.
    [Graphical view]
    PfamiPF04679. DNA_ligase_A_C. 1 hit.
    PF01068. DNA_ligase_A_M. 1 hit.
    PF04675. DNA_ligase_A_N. 1 hit.
    [Graphical view]
    SUPFAMiSSF117018. SSF117018. 1 hit.
    SSF50249. SSF50249. 1 hit.
    TIGRFAMsiTIGR00574. dnl1. 1 hit.
    PROSITEiPS00697. DNA_LIGASE_A1. 1 hit.
    PS50160. DNA_LIGASE_A3. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    C1H8X1-1 [UniParc]FASTAAdd to Basket

    « Hide

    MPIPAKKRKL NEPGPANQRT RGIESFFRSQ KSASATITPV QLEPGTPLAD    50
    EALARKLQAK WDEEAKSGNQ CSSNLQGYQH PSTLETKPEG LTQEFGTRLQ 100
    THGTSVCGDV SGNGKPNRVL SLQISSSAED TISQSIPFDQ SPLTFEPSSY 150
    AENLRAHWAL EGGHASYAIL TRAFVLVNNT QSRIKIVDTL VNLLRLLIEA 200
    DPDSLIFAVW LATNAIAPPY VPVELGLGGS AISKALKTAY GLNNQGLKTL 250
    WDKYGDAGDV AFEAKKRQTF TLRKPKPLSI RGVYESLLKI SRSKGPGSQE 300
    IKQRIVEKLL QDARGAEESR YIVRTLVQHL RIGAVKTTML IALARAFLYS 350
    RPSTKDFFVN NRTELSKLKR EEMASIYSRA EEIVKASYAR HPSYDDLVSC 400
    LLEIGISDEL LVRCGLTLHV PLHPMLGSIT RDLAQMLTKL QGRAFTCEYK 450
    YDGQRAQVHC DSSGKVSIFS RHLELMTDKY PDLVALIPRI RGEGVSSFIL 500
    EGEIVAVNQE TGELLAFQTL TNRAKKNVGI ESIEISVCLF AFDLMLLNGE 550
    PLLERPLRER RELLRGLFIE VPHHFTWVKN LDATSSDSEA VLSFFKEAID 600
    AKCEGLMVKL LDDSVQPELS KYESVAEPNL NSDLLLTTGP VEPNGNNKTR 650
    ARRSLLSTYE PDKRLESWLK VKKDYNAASD TLDLIPIAAW HGQGRKAKWW 700
    SPILLAVRNP ETGMLEAVTK CISGFTDKFY QANKEKYAEG SDNIISRPSY 750
    VDYRSEPEVW FEPQEVWEVA FADITLSPTY TAAIGLVSDE RGLSLRFPRF 800
    VRVREDKGLE EASSSDYLAN LWRKQTERLQ EEGAIAKPIT ESNHFGSEDD 850
    Length:850
    Mass (Da):94,872
    Last modified:May 26, 2009 - v1
    Checksum:iE7F4DC9356DA5CD7
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    DS572832 Genomic DNA. Translation: EEH36794.1.
    RefSeqiXP_002790976.1. XM_002790930.1.

    Genome annotation databases

    GeneIDi9094153.
    KEGGipbl:PAAG_07212.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    DS572832 Genomic DNA. Translation: EEH36794.1 .
    RefSeqi XP_002790976.1. XM_002790930.1.

    3D structure databases

    ModBasei Search...
    MobiDBi Search...

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    GeneIDi 9094153.
    KEGGi pbl:PAAG_07212.

    Phylogenomic databases

    KOi K10747.
    OrthoDBi EOG7TXKRG.

    Family and domain databases

    Gene3Di 1.10.3260.10. 1 hit.
    2.40.50.140. 1 hit.
    InterProi IPR000977. DNA_ligase_ATP-dep.
    IPR012309. DNA_ligase_ATP-dep_C.
    IPR012310. DNA_ligase_ATP-dep_cent.
    IPR016059. DNA_ligase_ATP-dep_CS.
    IPR012308. DNA_ligase_ATP-dep_N.
    IPR012340. NA-bd_OB-fold.
    [Graphical view ]
    Pfami PF04679. DNA_ligase_A_C. 1 hit.
    PF01068. DNA_ligase_A_M. 1 hit.
    PF04675. DNA_ligase_A_N. 1 hit.
    [Graphical view ]
    SUPFAMi SSF117018. SSF117018. 1 hit.
    SSF50249. SSF50249. 1 hit.
    TIGRFAMsi TIGR00574. dnl1. 1 hit.
    PROSITEi PS00697. DNA_LIGASE_A1. 1 hit.
    PS50160. DNA_LIGASE_A3. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: ATCC MYA-826 / Pb01Imported.

    Entry informationi

    Entry nameiC1H8X1_PARBA
    AccessioniPrimary (citable) accession number: C1H8X1
    Entry historyi
    Integrated into UniProtKB/TrEMBL: May 26, 2009
    Last sequence update: May 26, 2009
    Last modified: October 1, 2014
    This is version 34 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteomeImported

    External Data

    Dasty 3