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C1FQU5 (C1FQU5_CLOBJ) Unreviewed, UniProtKB/TrEMBL

Last modified May 1, 2013. Version 30. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesSubmitted name:
Endonuclease III EMBL ACO87117.1
EC=4.2.99.18 EMBL ACO87117.1
Gene names
Name:nth EMBL ACO87117.1
Ordered Locus Names:CLM_0259
OrganismClostridium botulinum (strain Kyoto / Type A2) [Complete proteome] [HAMAP]
Taxonomic identifier536232 [NCBI]
Taxonomic lineageBacteria › Firmicutes › Clostridia › Clostridiales › Clostridiaceae › Clostridium ›

Protein attributes

Sequence length213 AA.
Sequence statusComplete.
Protein existencePredicted

Sequences

Sequence LengthMass (Da)Tools
C1FQU5 [UniParc].

Last modified May 26, 2009. Version 1.
Checksum: FC371696A57984C4

FASTA21324,574
        10         20         30         40         50         60 
MNNHEIKNVI DILVDTYPDA NCELEHRNPF ELLIATVLSA QTTDKKVNEI TKELFKEYST 

        70         80         90        100        110        120 
PKDFLKLTRE ELEEKIKKIG LYRNKSKNIL LLCKELEEKF GSQVPNDFND LTSLPGVGRK 

       130        140        150        160        170        180 
TANVVLANAF KVPTIAVDTH VFRVSNRIGL VDASNVLKTE EQLQQAIPKE LWILMHHVLI 

       190        200        210 
FHGRRCCVAR KPKCEECTIK KYCKYYNEEI KPS

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References

[1]"Genome sequence of Clostridium botulinum A2 Kyoto."
Shrivastava S., Brinkac L.M., Brown J.L., Bruce D., Detter C.C., Johnson E.A., Munk C.A., Smith L.A., Smith T.J., Sutton G., Brettin T.S.
Submitted (OCT-2008) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: Kyoto / Type A2.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		CP001581 Genomic DNA. Translation: ACO87117.1.
RefSeqYP_002802521.1. NC_012563.1.

3D structure databases

ProteinModelPortalC1FQU5.
ModBaseSearch...

Protein-protein interaction databases

STRING536232.CLM_0259.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaACO87117; ACO87117; CLM_0259.
GeneID7764409.
KEGGcby:CLM_0259.
PATRIC19377137. VBICloBot91161_0201.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG0177.
HOGENOMHOG000252208.
KOK10773.
OMANNKSKHL.
ProtClustDBCLSK899320.

Family and domain databases

Gene3D1.10.1670.10. 1 hit.
1.10.340.30. 1 hit.
InterProIPR011257. DNA_glycosylase.
IPR004036. Endonuclease-III_CS2.
IPR005759. Endonuclease-III_Nth.
IPR004035. Endouclease-III_FeS-bd_BS.
IPR003651. Endouclease3_FeS-loop_motif.
IPR003265. HhH-GPD_domain.
IPR000445. HhH_motif.
IPR003583. Hlx-hairpin-Hlx_DNA-bd_motif.
IPR023170. HTH_base_excis_C.
[Graphical view]
PfamPF10576. EndIII_4Fe-2S. 1 hit.
PF00633. HHH. 1 hit.
PF00730. HhH-GPD. 1 hit.
[Graphical view]
PIRSFPIRSF001435. Nth. 1 hit.
SMARTSM00478. ENDO3c. 1 hit.
SM00525. FES. 1 hit.
SM00278. HhH1. 1 hit.
[Graphical view]
SUPFAMSSF48150. DNA_glycsylse. 1 hit.
TIGRFAMsTIGR01083. nth. 1 hit.
PROSITEPS00764. ENDONUCLEASE_III_1. 1 hit.
PS01155. ENDONUCLEASE_III_2. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameC1FQU5_CLOBJ
AccessionPrimary (citable) accession number: C1FQU5
Entry history
Integrated into UniProtKB/TrEMBL: May 26, 2009
Last sequence update: May 26, 2009
Last modified: May 1, 2013
This is version 30 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
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