C1FPE4 (C1FPE4_CLOBJ) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Glutamate decarboxylase EMBL ACO85906.1
EC=4.1.1.15 EMBL ACO85906.1

Gene names

Ordered Locus Names:

CLM_2134

Organism

Clostridium botulinum (strain Kyoto / Type A2) [Complete proteome] [HAMAP]

Taxonomic identifier

536232 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Firmicutes › Clostridia › Clostridiales › Clostridiaceae › Clostridium › Clostridium botulinum › Clostridium botulinum A

Protein attributes

Sequence length	467 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Cofactor	Pyridoxal phosphate By similarity. RuleBase RU000382
Sequence similarities	Belongs to the group II decarboxylase family. RuleBase RU000382

Ontologies

Keywords
Ligand	Pyridoxal phosphate RuleBase RU000382
Molecular function	Lyase RuleBase RU000382 EMBL ACO85906.1
Technical term	Complete proteome
Gene Ontology (GO)
Biological_process	glutamate metabolic process Inferred from electronic annotation. Source: InterPro
Molecular_function	glutamate decarboxylase activity Inferred from electronic annotation. Source: EC pyridoxal phosphate binding Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	C1FPE4 [UniParc]. Last modified May 26, 2009. Version 1. Checksum: 533231CB09C8E733	FASTA	467	53,660
	10 20 30 40 50 60 MLYSSKNKQS NDTYATPIFG ITKDKYSIPK YKINENSIAP NIAYRMIKDE LMNEGNARLN 70 80 90 100 110 120 LATFCQTYME DKATKLMAET LQKNAIDKSE YPQTAEIENR CVNIISDLWN VPKDMNFLGT 130 140 150 160 170 180 STVGSSEACM LGGMSMKFRW RDQAKKLGID INKKKPNLVI SSGYQVCWEK FCVYWDIEMR 190 200 210 220 230 240 TVPMDEDNLS LNIDKILDYV DEYTIGIIGI LGITYTGKFD DIKALDDAIE KYNSNHDIKV 250 260 270 280 290 300 YIHVDAASGG FFTPFINPEI LWDFRLKNVV SINASGHKYG LVYPGIGWIL WKDQEYLPKD 310 320 330 340 350 360 LIFEVSYLGG KMPTLAINFS RSGSQIIGQY YNFLRFGFEG YKKIHERTKE VAMYISKELE 370 380 390 400 410 420 ATGLFSIYND GSNLPIVCYK LKEQSKVKWN LYDLSDRLAM KGWQIPAYPL PENLNHIIIQ 430 440 450 460 RIVCRSDLGY NLAELLIKDF KTAINDLNNA HILFHEEENQ GIYGFTH

References

[1]

"Genome sequence of Clostridium botulinum A2 Kyoto." Shrivastava S., Brinkac L.M., Brown J.L., Bruce D., Detter C.C., Johnson E.A., Munk C.A., Smith L.A., Smith T.J., Sutton G., Brettin T.S. Submitted (OCT-2008) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: Kyoto / Type A2.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP001581 Genomic DNA. Translation: ACO85906.1.
RefSeq	YP_002804306.1. NC_012563.1.
3D structure databases
ProteinModelPortal	C1FPE4.
ModBase	Search...
Protein-protein interaction databases
STRING	536232.CLM_2134.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	ACO85906; ACO85906; CLM_2134.
GeneID	7765388.
KEGG	cby:CLM_2134.
PATRIC	19380759. VBICloBot91161_2005.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	COG0076.
HOGENOM	HOG000070228.
KO	K01580.
OMA	PMDKEHM.
ProtClustDB	CLSK876864.
Family and domain databases
Gene3D	3.40.640.10. 1 hit.
InterPro	IPR010107. Glutamate_decarboxylase. IPR002129. PyrdxlP-dep_de-COase. IPR015424. PyrdxlP-dep_Trfase. IPR015421. PyrdxlP-dep_Trfase_major_sub1. [Graphical view]
PANTHER	PTHR11999:SF1. PTHR11999:SF1. 1 hit.
Pfam	PF00282. Pyridoxal_deC. 1 hit. [Graphical view]
SUPFAM	SSF53383. PyrdxlP-dep_Trfase_major. 1 hit.
TIGRFAMs	TIGR01788. Glu-decarb-GAD. 1 hit.
ProtoNet	Search...

Entry information

Entry name

C1FPE4_CLOBJ

Accession

Primary (citable) accession number: C1FPE4

Entry history

Integrated into UniProtKB/TrEMBL:	May 26, 2009
Last sequence update:	May 26, 2009
Last modified:	May 1, 2013
This is version 30 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)