C1F9R2 (C1F9R2_ACIC5) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Recommended name:
Probable tRNA threonylcarbamoyladenosine biosynthesis protein Gcp HAMAP MF_01445

Alternative name(s):
t(6)A37 threonylcarbamoyladenosine biosynthesis protein HAMAP MF_01445

Gene names

Name:	gcp HAMAP MF_01445
Ordered Locus Names:	ACP_2221

Organism

Acidobacterium capsulatum (strain ATCC 51196 / DSM 11244 / JCM 7670) [Complete proteome] [HAMAP]

Taxonomic identifier

240015 [NCBI]

Taxonomic lineage

Bacteria › Acidobacteria › Acidobacteriales › Acidobacteriaceae › Acidobacterium

Protein attributes

Sequence length	401 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Function	Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t6A37) in tRNAs that read codons beginning with adenine By similarity. HAMAP MF_01445
Subcellular location	Cytoplasm By similarity HAMAP MF_01445 SAAS SAAS017860.
Sequence similarities	Belongs to the KAE1 / YgjD family. HAMAP MF_01445

Ontologies

Keywords
Biological process	tRNA processing HAMAP MF_01445 SAAS SAAS017860
Cellular component	Cytoplasm HAMAP MF_01445 SAAS SAAS017860
Molecular function	Hydrolase Protease EMBL ACO34646.1
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	proteolysis Inferred from electronic annotation. Source: UniProtKB-KW threonylcarbamoyladenosine biosynthetic process Inferred from electronic annotation. Source: HAMAP
Cellular component	cytoplasm Inferred from electronic annotation. Source: UniProtKB-SubCell
Molecular function	metalloendopeptidase activity Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	C1F9R2 [UniParc]. Last modified May 26, 2009. Version 1. Checksum: AC29034C710321D6	FASTA	401	42,170
	10 20 30 40 50 60 MASGQTGERA RTGLILGIES SCDETSAAVV RGGREALSNV IASQIAVHAP FGGVVPELAS 70 80 90 100 110 120 REHLRAIVPV VEQAMAGAGV AFDDLDAVAV TEGPGLPGAL LVGVSYAKAL ALALGKPLIA 130 140 150 160 170 180 VNHLEGHIHA VLLERVLQPA ETQATPEHGQ PKLALVVSGG HTHLYLAQET HHAWTYRNVG 190 200 210 220 230 240 RTVDDAAGEA FDKVAKLLGL GYPGGPWVDA LAPFGDARAV PFSFAQVKAK AHRRADPVAL 250 260 270 280 290 300 HPEEATYFSF SGIKTAVLRY VQTHDMEARI AARRQAMATM PDASPRRDLE AVRALCDQES 310 320 330 340 350 360 LDLLASFQRA VVGDLVRKTF RAAERYDVAE ILVSGGVAAN RELRERFTAE AAAQGLPVAF 370 380 390 400 PSLKLATDNA AMIAAAAWPK LITSEFAGET LTAAAGLKLG S

References

[1]

"Three genomes from the phylum Acidobacteria provide insight into the lifestyles of these microorganisms in soils." Ward N.L., Challacombe J.F., Janssen P.H., Henrissat B., Coutinho P.M., Wu M., Xie G., Haft D.H., Sait M., Badger J., Barabote R.D., Bradley B., Brettin T.S., Brinkac L.M., Bruce D., Creasy T., Daugherty S.C., Davidsen T.M. , DeBoy R.T., Detter J.C., Dodson R.J., Durkin A.S., Ganapathy A., Gwinn-Giglio M., Han C.S., Khouri H., Kiss H., Kothari S.P., Madupu R., Nelson K.E., Nelson W.C., Paulsen I., Penn K., Ren Q., Rosovitz M.J., Selengut J.D., Shrivastava S., Sullivan S.A., Tapia R., Thompson L.S., Watkins K.L., Yang Q., Yu C., Zafar N., Zhou L., Kuske C.R. Appl. Environ. Microbiol. 75:2046-2056(2009) [PubMed: 19201974] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP001472 Genomic DNA. Translation: ACO34646.1.
RefSeq	YP_002755272.1. NC_012483.1.
3D structure databases
ModBase	Search...
Protein-protein interaction databases
STRING	C1F9R2.
Protein family/group databases
MEROPS	M22.001.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	7699092.
GenomeReviews	Gene locus ACP_2221 in contig CP001472_GR.
KEGG	aca:ACP_2221.
PATRIC	20667697. VBIAciCap40988_2127.
Organism-specific databases
CMR	Search...
Phylogenomic databases
OMA	MEVIGQT.
ProtClustDB	PRK09604.
Family and domain databases
HAMAP	MF_01445. gcp. [Tree]
InterPro	IPR022450. Pept_M22_O-sialoglycopept. IPR000905. Peptidase_M22. IPR017860. Peptidase_M22_CS. IPR017861. Peptidase_M22_subgr. [Graphical view]
KO	K01409.
Pfam	PF00814. Peptidase_M22. 1 hit. [Graphical view]
PRINTS	PR00789. OSIALOPTASE.
TIGRFAMs	TIGR03723. Bact_gcp. 1 hit. TIGR00329. Gcp_kae1. 1 hit.
PROSITE	PS01016. GLYCOPROTEASE. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

C1F9R2_ACIC5

Accession

Primary (citable) accession number: C1F9R2

Entry history

Integrated into UniProtKB/TrEMBL:	May 26, 2009
Last sequence update:	May 26, 2009
Last modified:	December 14, 2011
This is version 21 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)