C1F902 (RL9_ACIC5) Reviewed, UniProtKB/Swiss-Prot

Names and origin

Protein names

Recommended name:
50S ribosomal protein L9

Gene names

Name:	rplI
Ordered Locus Names:	ACP_2064

Organism

Acidobacterium capsulatum (strain ATCC 51196 / DSM 11244 / JCM 7670) [Complete proteome] [HAMAP]

Taxonomic identifier

240015 [NCBI]

Taxonomic lineage

Bacteria › Acidobacteria › Acidobacteriales › Acidobacteriaceae › Acidobacterium

Protein attributes

Sequence length	151 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Function	Binds to the 23S rRNA By similarity. HAMAP MF_00503
Sequence similarities	Belongs to the ribosomal protein L9P family.

Ontologies

Keywords
Ligand	RNA-binding rRNA-binding
Molecular function	Ribonucleoprotein Ribosomal protein
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	translation Inferred from electronic annotation. Source: InterPro
Cellular component	ribosome Inferred from electronic annotation. Source: UniProtKB-KW
Molecular function	rRNA binding Inferred from electronic annotation. Source: UniProtKB-KW structural constituent of ribosome Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Molecule processing
	Chain	1 – 151	151	50S ribosomal protein L9 HAMAP MF_00503		PRO_1000145936

Sequences

	Sequence		Length	Mass (Da)
	C1F902 [UniParc]. Last modified May 26, 2009. Version 1. Checksum: D89BAE0868302B78	FASTA	151	16,751
	10 20 30 40 50 60 MEVILKEDIE TLGHRGDIVK VADGYGRNYL LPKKLAMEAT AANKAVIEQM KASAVRRSAK 70 80 90 100 110 120 EKAEAEQLVA QLDAVALVFE RKVGDHDHLF GSVTSSDIAQ QLEQQGFHID RRKVQLEEPL 130 140 150 KQTGEFLIPV KLHREVTAHV KVTVKGEETA A

References

[1]

"Three genomes from the phylum Acidobacteria provide insight into the lifestyles of these microorganisms in soils." Ward N.L., Challacombe J.F., Janssen P.H., Henrissat B., Coutinho P.M., Wu M., Xie G., Haft D.H., Sait M., Badger J., Barabote R.D., Bradley B., Brettin T.S., Brinkac L.M., Bruce D., Creasy T., Daugherty S.C., Davidsen T.M. , DeBoy R.T., Detter J.C., Dodson R.J., Durkin A.S., Ganapathy A., Gwinn-Giglio M., Han C.S., Khouri H., Kiss H., Kothari S.P., Madupu R., Nelson K.E., Nelson W.C., Paulsen I., Penn K., Ren Q., Rosovitz M.J., Selengut J.D., Shrivastava S., Sullivan S.A., Tapia R., Thompson L.S., Watkins K.L., Yang Q., Yu C., Zafar N., Zhou L., Kuske C.R. Appl. Environ. Microbiol. 75:2046-2056(2009) [PubMed: 19201974] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: ATCC 51196 / DSM 11244 / JCM 7670.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP001472 Genomic DNA. Translation: ACO34270.1.
RefSeq	YP_002755120.1. NC_012483.1.
3D structure databases
ModBase	Search...
Protein-protein interaction databases
STRING	C1F902.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	7700626.
GenomeReviews	Gene locus ACP_2064 in contig CP001472_GR.
KEGG	aca:ACP_2064.
PATRIC	20667403. VBIAciCap40988_1985.
Organism-specific databases
CMR	Search...
Phylogenomic databases
OMA	SGKLFGT.
ProtClustDB	PRK00137.
Family and domain databases
HAMAP	MF_00503. Ribosomal_L9. [Tree]
InterPro	IPR000244. Ribosomal_L9. IPR009027. Ribosomal_L9/RNase_H1_N. IPR020594. Ribosomal_L9_bac/chp. IPR020069. Ribosomal_L9_C. IPR020070. Ribosomal_L9_N. [Graphical view]
Gene3D	G3DSA:3.10.430.100. Ribosomal_L9. 1 hit. G3DSA:3.40.5.10. Ribosomal_L9. 1 hit.
KO	K02939.
PANTHER	PTHR21368. Ribosomal_L9. 1 hit.
Pfam	PF03948. Ribosomal_L9_C. 1 hit. PF01281. Ribosomal_L9_N. 1 hit. [Graphical view]
SUPFAM	SSF55658. L9_N_like. 1 hit. SSF55653. Ribosomal_L9. 1 hit.
TIGRFAMs	TIGR00158. L9. 1 hit.
PROSITE	PS00651. RIBOSOMAL_L9. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

RL9_ACIC5

Accession

Primary (citable) accession number: C1F902

Entry history

Integrated into UniProtKB/Swiss-Prot:	July 28, 2009
Last sequence update:	May 26, 2009
Last modified:	January 25, 2012
This is version 20 of the entry and version 1 of the sequence. [Complete history]

Entry status

Reviewed (UniProtKB/Swiss-Prot)

Annotation program

Prokaryotic Protein Annotation Program