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C1F736

- C1F736_ACIC5

UniProt

C1F736 - C1F736_ACIC5

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Protein
Submitted name: Putative DNA ligase, ATP-dependent
Gene
ACP_3506
Organism
Acidobacterium capsulatum (strain ATCC 51196 / DSM 11244 / JCM 7670)
Status
Unreviewed - Annotation score: 1 out of 5 - Protein predictedi

Functioni

GO - Molecular functioni

  1. ATP binding Source: InterPro
  2. DNA ligase (ATP) activity Source: InterPro

GO - Biological processi

  1. DNA recombination Source: InterPro
  2. DNA repair Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

LigaseImported

Enzyme and pathway databases

BioCyciACAP240015:GKF4-3452-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
Putative DNA ligase, ATP-dependentImported
Gene namesi
Ordered Locus Names:ACP_3506Imported
OrganismiAcidobacterium capsulatum (strain ATCC 51196 / DSM 11244 / JCM 7670)Imported
Taxonomic identifieri240015 [NCBI]
Taxonomic lineageiBacteriaAcidobacteriaAcidobacterialesAcidobacteriaceaeAcidobacterium
ProteomesiUP000002207: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi240015.ACP_3506.

Structurei

3D structure databases

ProteinModelPortaliC1F736.

Family & Domainsi

Phylogenomic databases

eggNOGiCOG3285.
HOGENOMiHOG000222509.
KOiK01971.
OMAiSACDMAL.
OrthoDBiEOG661H49.

Family and domain databases

Gene3Di2.40.50.140. 1 hit.
InterProiIPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR014146. DNA_pol_LigD_ligase_dom.
IPR014144. LigD_PE_domain.
IPR014145. LigD_pol.
IPR012340. NA-bd_OB-fold.
IPR014143. NHEJ_ligase_prk.
[Graphical view]
PfamiPF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
PF13298. LigD_N. 1 hit.
[Graphical view]
SUPFAMiSSF50249. SSF50249. 1 hit.
TIGRFAMsiTIGR02777. LigD_PE_dom. 1 hit.
TIGR02778. ligD_pol. 1 hit.
TIGR02779. NHEJ_ligase_lig. 1 hit.
TIGR02776. NHEJ_ligase_prk. 1 hit.
PROSITEiPS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

C1F736-1 [UniParc]FASTAAdd to Basket

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MRDFGVTPEP KGAAGKRLNA GALSFVVQKH AASHLHYDFR LEWQGVLKSW    50
AVAKGPSYYP GDKRLAVEVE DHPLAYGGFE GIIPQGQYGG GTVMLWDRGT 100
WEPLGDAARQ LRDGNLKFRL HGEKLKGCWA LVRMKGKFAG RSKPSWLLIK 150
EHDESERGDD APAIVDEAPL SVVSGRDMQQ IAEAQDAVWN AKGAQAQSSA 200
AAHRANAPKQ SMPAALLPRE IAATLKRLPS EALPRFVPPQ LATLVSEPGA 250
GENRVYEIKL DGYRIEARVD KKADPPVQLL TRTGLDWTSR MRPLADALLR 300
LPVQTALLDG ELVVLEEKGT TSFAKLQAVL KDDSRHSLTY FAFDLLHLDG 350
HNLRGEPLLI RKKILSALLT DLPASSAVRF SEHVKGNGEE IFQKACKLGA 400
EGVISKLAQG FYHSGRSRDW WKLKCYLEQE LVIGGYTLPS NGTYGVGALL 450
LGYYDAGKLI YAGRTGTGFT RATHRRMREQ LEAIRRGTAP FAKVEQDARR 500
GAIWVQPQLV AQVSFASWTT DGLVRQAAFK GLREDKPAKT VRREGGQMPE 550
SEGKAAKKPR ANSTTVRSEL RLTHRDKVLD KDSGLTKEAL ADYYARIAPF 600
MLPHIQGRAV SIVRCPAGSD LSCFFQKHNN HTLPGEIESI EIASRKTGKV 650
EPFLTISSAN DLLVLAQASV LEIHAWGSTR DSLEKPDRLT IDLDPDDAID 700
WKTLAGAAVE VRKRLARAGV KSFLKSTGGK GLHVVAPIEP EHEWPEVKEF 750
AHRMVLEMEK ENPDLYLTRM TKAARKGKIY LDYLRNERGA TAIAPFSPRA 800
RPGAPVALPL RWSELKSAER PIFRVTEFDG WRKRLKADPW RGFLQLHQSL 850
RLPEAARVSP GGR 863
Length:863
Mass (Da):95,572
Last modified:May 26, 2009 - v1
Checksum:i7A93059AF0487F45
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP001472 Genomic DNA. Translation: ACO34127.1.
RefSeqiYP_002756500.1. NC_012483.1.

Genome annotation databases

EnsemblBacteriaiACO34127; ACO34127; ACP_3506.
GeneIDi7698868.
KEGGiaca:ACP_3506.
PATRICi20670209. VBIAciCap40988_3360.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP001472 Genomic DNA. Translation: ACO34127.1 .
RefSeqi YP_002756500.1. NC_012483.1.

3D structure databases

ProteinModelPortali C1F736.
ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

STRINGi 240015.ACP_3506.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai ACO34127 ; ACO34127 ; ACP_3506 .
GeneIDi 7698868.
KEGGi aca:ACP_3506.
PATRICi 20670209. VBIAciCap40988_3360.

Phylogenomic databases

eggNOGi COG3285.
HOGENOMi HOG000222509.
KOi K01971.
OMAi SACDMAL.
OrthoDBi EOG661H49.

Enzyme and pathway databases

BioCyci ACAP240015:GKF4-3452-MONOMER.

Family and domain databases

Gene3Di 2.40.50.140. 1 hit.
InterProi IPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR014146. DNA_pol_LigD_ligase_dom.
IPR014144. LigD_PE_domain.
IPR014145. LigD_pol.
IPR012340. NA-bd_OB-fold.
IPR014143. NHEJ_ligase_prk.
[Graphical view ]
Pfami PF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
PF13298. LigD_N. 1 hit.
[Graphical view ]
SUPFAMi SSF50249. SSF50249. 1 hit.
TIGRFAMsi TIGR02777. LigD_PE_dom. 1 hit.
TIGR02778. ligD_pol. 1 hit.
TIGR02779. NHEJ_ligase_lig. 1 hit.
TIGR02776. NHEJ_ligase_prk. 1 hit.
PROSITEi PS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC 51196 / DSM 11244 / JCM 7670.

Entry informationi

Entry nameiC1F736_ACIC5
AccessioniPrimary (citable) accession number: C1F736
Entry historyi
Integrated into UniProtKB/TrEMBL: May 26, 2009
Last sequence update: May 26, 2009
Last modified: May 14, 2014
This is version 33 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome

External Data

Dasty 3

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