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C1F736

- C1F736_ACIC5

UniProt

C1F736 - C1F736_ACIC5

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Protein
Submitted name:

Putative DNA ligase, ATP-dependent

Gene

ACP_3506

Organism
Acidobacterium capsulatum (strain ATCC 51196 / DSM 11244 / JCM 7670)
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi

Functioni

GO - Molecular functioni

  1. ATP binding Source: InterPro
  2. DNA ligase (ATP) activity Source: InterPro

GO - Biological processi

  1. DNA recombination Source: InterPro
  2. DNA repair Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

LigaseImported

Enzyme and pathway databases

BioCyciACAP240015:GKF4-3452-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
Putative DNA ligase, ATP-dependentImported
Gene namesi
Ordered Locus Names:ACP_3506Imported
OrganismiAcidobacterium capsulatum (strain ATCC 51196 / DSM 11244 / JCM 7670)Imported
Taxonomic identifieri240015 [NCBI]
Taxonomic lineageiBacteriaAcidobacteriaAcidobacterialesAcidobacteriaceaeAcidobacterium
ProteomesiUP000002207: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi240015.ACP_3506.

Structurei

3D structure databases

ProteinModelPortaliC1F736.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Phylogenomic databases

eggNOGiCOG3285.
HOGENOMiHOG000222509.
KOiK01971.
OMAiSACDMAL.
OrthoDBiEOG661H49.

Family and domain databases

Gene3Di2.40.50.140. 1 hit.
InterProiIPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR014146. DNA_pol_LigD_ligase_dom.
IPR014144. LigD_PE_domain.
IPR014145. LigD_pol.
IPR012340. NA-bd_OB-fold.
IPR014143. NHEJ_ligase_prk.
[Graphical view]
PfamiPF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
PF13298. LigD_N. 1 hit.
[Graphical view]
SUPFAMiSSF50249. SSF50249. 1 hit.
TIGRFAMsiTIGR02777. LigD_PE_dom. 1 hit.
TIGR02778. ligD_pol. 1 hit.
TIGR02779. NHEJ_ligase_lig. 1 hit.
TIGR02776. NHEJ_ligase_prk. 1 hit.
PROSITEiPS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

C1F736 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MRDFGVTPEP KGAAGKRLNA GALSFVVQKH AASHLHYDFR LEWQGVLKSW
60 70 80 90 100
AVAKGPSYYP GDKRLAVEVE DHPLAYGGFE GIIPQGQYGG GTVMLWDRGT
110 120 130 140 150
WEPLGDAARQ LRDGNLKFRL HGEKLKGCWA LVRMKGKFAG RSKPSWLLIK
160 170 180 190 200
EHDESERGDD APAIVDEAPL SVVSGRDMQQ IAEAQDAVWN AKGAQAQSSA
210 220 230 240 250
AAHRANAPKQ SMPAALLPRE IAATLKRLPS EALPRFVPPQ LATLVSEPGA
260 270 280 290 300
GENRVYEIKL DGYRIEARVD KKADPPVQLL TRTGLDWTSR MRPLADALLR
310 320 330 340 350
LPVQTALLDG ELVVLEEKGT TSFAKLQAVL KDDSRHSLTY FAFDLLHLDG
360 370 380 390 400
HNLRGEPLLI RKKILSALLT DLPASSAVRF SEHVKGNGEE IFQKACKLGA
410 420 430 440 450
EGVISKLAQG FYHSGRSRDW WKLKCYLEQE LVIGGYTLPS NGTYGVGALL
460 470 480 490 500
LGYYDAGKLI YAGRTGTGFT RATHRRMREQ LEAIRRGTAP FAKVEQDARR
510 520 530 540 550
GAIWVQPQLV AQVSFASWTT DGLVRQAAFK GLREDKPAKT VRREGGQMPE
560 570 580 590 600
SEGKAAKKPR ANSTTVRSEL RLTHRDKVLD KDSGLTKEAL ADYYARIAPF
610 620 630 640 650
MLPHIQGRAV SIVRCPAGSD LSCFFQKHNN HTLPGEIESI EIASRKTGKV
660 670 680 690 700
EPFLTISSAN DLLVLAQASV LEIHAWGSTR DSLEKPDRLT IDLDPDDAID
710 720 730 740 750
WKTLAGAAVE VRKRLARAGV KSFLKSTGGK GLHVVAPIEP EHEWPEVKEF
760 770 780 790 800
AHRMVLEMEK ENPDLYLTRM TKAARKGKIY LDYLRNERGA TAIAPFSPRA
810 820 830 840 850
RPGAPVALPL RWSELKSAER PIFRVTEFDG WRKRLKADPW RGFLQLHQSL
860
RLPEAARVSP GGR
Length:863
Mass (Da):95,572
Last modified:May 26, 2009 - v1
Checksum:i7A93059AF0487F45
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP001472 Genomic DNA. Translation: ACO34127.1.
RefSeqiYP_002756500.1. NC_012483.1.

Genome annotation databases

EnsemblBacteriaiACO34127; ACO34127; ACP_3506.
GeneIDi7698868.
KEGGiaca:ACP_3506.
PATRICi20670209. VBIAciCap40988_3360.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP001472 Genomic DNA. Translation: ACO34127.1 .
RefSeqi YP_002756500.1. NC_012483.1.

3D structure databases

ProteinModelPortali C1F736.
ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

STRINGi 240015.ACP_3506.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai ACO34127 ; ACO34127 ; ACP_3506 .
GeneIDi 7698868.
KEGGi aca:ACP_3506.
PATRICi 20670209. VBIAciCap40988_3360.

Phylogenomic databases

eggNOGi COG3285.
HOGENOMi HOG000222509.
KOi K01971.
OMAi SACDMAL.
OrthoDBi EOG661H49.

Enzyme and pathway databases

BioCyci ACAP240015:GKF4-3452-MONOMER.

Family and domain databases

Gene3Di 2.40.50.140. 1 hit.
InterProi IPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR014146. DNA_pol_LigD_ligase_dom.
IPR014144. LigD_PE_domain.
IPR014145. LigD_pol.
IPR012340. NA-bd_OB-fold.
IPR014143. NHEJ_ligase_prk.
[Graphical view ]
Pfami PF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
PF13298. LigD_N. 1 hit.
[Graphical view ]
SUPFAMi SSF50249. SSF50249. 1 hit.
TIGRFAMsi TIGR02777. LigD_PE_dom. 1 hit.
TIGR02778. ligD_pol. 1 hit.
TIGR02779. NHEJ_ligase_lig. 1 hit.
TIGR02776. NHEJ_ligase_prk. 1 hit.
PROSITEi PS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC 51196 / DSM 11244 / JCM 7670Imported.

Entry informationi

Entry nameiC1F736_ACIC5
AccessioniPrimary (citable) accession number: C1F736
Entry historyi
Integrated into UniProtKB/TrEMBL: May 26, 2009
Last sequence update: May 26, 2009
Last modified: October 1, 2014
This is version 34 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3