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C1F736 (C1F736_ACIC5) Unreviewed, UniProtKB/TrEMBL

Last modified May 14, 2014. Version 33. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein attributes

Sequence length863 AA.
Sequence statusComplete.
Protein existencePredicted

Ontologies

Keywords
   Molecular functionLigase EMBL ACO34127.1
   Technical termComplete proteome
Gene Ontology (GO)
   Biological_processDNA recombination

Inferred from electronic annotation. Source: InterPro

DNA repair

Inferred from electronic annotation. Source: InterPro

   Molecular_functionATP binding

Inferred from electronic annotation. Source: InterPro

DNA ligase (ATP) activity

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
C1F736 [UniParc].

Last modified May 26, 2009. Version 1.
Checksum: 7A93059AF0487F45

FASTA86395,572
        10         20         30         40         50         60 
MRDFGVTPEP KGAAGKRLNA GALSFVVQKH AASHLHYDFR LEWQGVLKSW AVAKGPSYYP 

        70         80         90        100        110        120 
GDKRLAVEVE DHPLAYGGFE GIIPQGQYGG GTVMLWDRGT WEPLGDAARQ LRDGNLKFRL 

       130        140        150        160        170        180 
HGEKLKGCWA LVRMKGKFAG RSKPSWLLIK EHDESERGDD APAIVDEAPL SVVSGRDMQQ 

       190        200        210        220        230        240 
IAEAQDAVWN AKGAQAQSSA AAHRANAPKQ SMPAALLPRE IAATLKRLPS EALPRFVPPQ 

       250        260        270        280        290        300 
LATLVSEPGA GENRVYEIKL DGYRIEARVD KKADPPVQLL TRTGLDWTSR MRPLADALLR 

       310        320        330        340        350        360 
LPVQTALLDG ELVVLEEKGT TSFAKLQAVL KDDSRHSLTY FAFDLLHLDG HNLRGEPLLI 

       370        380        390        400        410        420 
RKKILSALLT DLPASSAVRF SEHVKGNGEE IFQKACKLGA EGVISKLAQG FYHSGRSRDW 

       430        440        450        460        470        480 
WKLKCYLEQE LVIGGYTLPS NGTYGVGALL LGYYDAGKLI YAGRTGTGFT RATHRRMREQ 

       490        500        510        520        530        540 
LEAIRRGTAP FAKVEQDARR GAIWVQPQLV AQVSFASWTT DGLVRQAAFK GLREDKPAKT 

       550        560        570        580        590        600 
VRREGGQMPE SEGKAAKKPR ANSTTVRSEL RLTHRDKVLD KDSGLTKEAL ADYYARIAPF 

       610        620        630        640        650        660 
MLPHIQGRAV SIVRCPAGSD LSCFFQKHNN HTLPGEIESI EIASRKTGKV EPFLTISSAN 

       670        680        690        700        710        720 
DLLVLAQASV LEIHAWGSTR DSLEKPDRLT IDLDPDDAID WKTLAGAAVE VRKRLARAGV 

       730        740        750        760        770        780 
KSFLKSTGGK GLHVVAPIEP EHEWPEVKEF AHRMVLEMEK ENPDLYLTRM TKAARKGKIY 

       790        800        810        820        830        840 
LDYLRNERGA TAIAPFSPRA RPGAPVALPL RWSELKSAER PIFRVTEFDG WRKRLKADPW 

       850        860 
RGFLQLHQSL RLPEAARVSP GGR 

« Hide

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP001472 Genomic DNA. Translation: ACO34127.1.
RefSeqYP_002756500.1. NC_012483.1.

3D structure databases

ProteinModelPortalC1F736.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING240015.ACP_3506.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaACO34127; ACO34127; ACP_3506.
GeneID7698868.
KEGGaca:ACP_3506.
PATRIC20670209. VBIAciCap40988_3360.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG3285.
HOGENOMHOG000222509.
KOK01971.
OMASACDMAL.
OrthoDBEOG661H49.

Enzyme and pathway databases

BioCycACAP240015:GKF4-3452-MONOMER.

Family and domain databases

Gene3D2.40.50.140. 1 hit.
InterProIPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR014146. DNA_pol_LigD_ligase_dom.
IPR014144. LigD_PE_domain.
IPR014145. LigD_pol.
IPR012340. NA-bd_OB-fold.
IPR014143. NHEJ_ligase_prk.
[Graphical view]
PfamPF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
PF13298. LigD_N. 1 hit.
[Graphical view]
SUPFAMSSF50249. SSF50249. 1 hit.
TIGRFAMsTIGR02777. LigD_PE_dom. 1 hit.
TIGR02778. ligD_pol. 1 hit.
TIGR02779. NHEJ_ligase_lig. 1 hit.
TIGR02776. NHEJ_ligase_prk. 1 hit.
PROSITEPS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameC1F736_ACIC5
AccessionPrimary (citable) accession number: C1F736
Entry history
Integrated into UniProtKB/TrEMBL: May 26, 2009
Last sequence update: May 26, 2009
Last modified: May 14, 2014
This is version 33 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)