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C1F736

- C1F736_ACIC5

UniProt

C1F736 - C1F736_ACIC5

Protein
Submitted name:

Putative DNA ligase, ATP-dependent

Gene

ACP_3506

Organism
Acidobacterium capsulatum (strain ATCC 51196 / DSM 11244 / JCM 7670)
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi
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    • History
      Entry version 34 (01 Oct 2014)
      Sequence version 1 (26 May 2009)
      Previous versions | rss
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    Functioni

    GO - Molecular functioni

    1. ATP binding Source: InterPro
    2. DNA ligase (ATP) activity Source: InterPro

    GO - Biological processi

    1. DNA recombination Source: InterPro
    2. DNA repair Source: InterPro

    Keywords - Molecular functioni

    LigaseImported

    Enzyme and pathway databases

    BioCyciACAP240015:GKF4-3452-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    Putative DNA ligase, ATP-dependentImported
    Gene namesi
    Ordered Locus Names:ACP_3506Imported
    OrganismiAcidobacterium capsulatum (strain ATCC 51196 / DSM 11244 / JCM 7670)Imported
    Taxonomic identifieri240015 [NCBI]
    Taxonomic lineageiBacteriaAcidobacteriaAcidobacterialesAcidobacteriaceaeAcidobacterium
    ProteomesiUP000002207: Chromosome

    Interactioni

    Protein-protein interaction databases

    STRINGi240015.ACP_3506.

    Structurei

    3D structure databases

    ProteinModelPortaliC1F736.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Phylogenomic databases

    eggNOGiCOG3285.
    HOGENOMiHOG000222509.
    KOiK01971.
    OMAiSACDMAL.
    OrthoDBiEOG661H49.

    Family and domain databases

    Gene3Di2.40.50.140. 1 hit.
    InterProiIPR012309. DNA_ligase_ATP-dep_C.
    IPR012310. DNA_ligase_ATP-dep_cent.
    IPR014146. DNA_pol_LigD_ligase_dom.
    IPR014144. LigD_PE_domain.
    IPR014145. LigD_pol.
    IPR012340. NA-bd_OB-fold.
    IPR014143. NHEJ_ligase_prk.
    [Graphical view]
    PfamiPF04679. DNA_ligase_A_C. 1 hit.
    PF01068. DNA_ligase_A_M. 1 hit.
    PF13298. LigD_N. 1 hit.
    [Graphical view]
    SUPFAMiSSF50249. SSF50249. 1 hit.
    TIGRFAMsiTIGR02777. LigD_PE_dom. 1 hit.
    TIGR02778. ligD_pol. 1 hit.
    TIGR02779. NHEJ_ligase_lig. 1 hit.
    TIGR02776. NHEJ_ligase_prk. 1 hit.
    PROSITEiPS50160. DNA_LIGASE_A3. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    C1F736-1 [UniParc]FASTAAdd to Basket

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    MRDFGVTPEP KGAAGKRLNA GALSFVVQKH AASHLHYDFR LEWQGVLKSW    50
    AVAKGPSYYP GDKRLAVEVE DHPLAYGGFE GIIPQGQYGG GTVMLWDRGT 100
    WEPLGDAARQ LRDGNLKFRL HGEKLKGCWA LVRMKGKFAG RSKPSWLLIK 150
    EHDESERGDD APAIVDEAPL SVVSGRDMQQ IAEAQDAVWN AKGAQAQSSA 200
    AAHRANAPKQ SMPAALLPRE IAATLKRLPS EALPRFVPPQ LATLVSEPGA 250
    GENRVYEIKL DGYRIEARVD KKADPPVQLL TRTGLDWTSR MRPLADALLR 300
    LPVQTALLDG ELVVLEEKGT TSFAKLQAVL KDDSRHSLTY FAFDLLHLDG 350
    HNLRGEPLLI RKKILSALLT DLPASSAVRF SEHVKGNGEE IFQKACKLGA 400
    EGVISKLAQG FYHSGRSRDW WKLKCYLEQE LVIGGYTLPS NGTYGVGALL 450
    LGYYDAGKLI YAGRTGTGFT RATHRRMREQ LEAIRRGTAP FAKVEQDARR 500
    GAIWVQPQLV AQVSFASWTT DGLVRQAAFK GLREDKPAKT VRREGGQMPE 550
    SEGKAAKKPR ANSTTVRSEL RLTHRDKVLD KDSGLTKEAL ADYYARIAPF 600
    MLPHIQGRAV SIVRCPAGSD LSCFFQKHNN HTLPGEIESI EIASRKTGKV 650
    EPFLTISSAN DLLVLAQASV LEIHAWGSTR DSLEKPDRLT IDLDPDDAID 700
    WKTLAGAAVE VRKRLARAGV KSFLKSTGGK GLHVVAPIEP EHEWPEVKEF 750
    AHRMVLEMEK ENPDLYLTRM TKAARKGKIY LDYLRNERGA TAIAPFSPRA 800
    RPGAPVALPL RWSELKSAER PIFRVTEFDG WRKRLKADPW RGFLQLHQSL 850
    RLPEAARVSP GGR 863
    Length:863
    Mass (Da):95,572
    Last modified:May 26, 2009 - v1
    Checksum:i7A93059AF0487F45
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP001472 Genomic DNA. Translation: ACO34127.1.
    RefSeqiYP_002756500.1. NC_012483.1.

    Genome annotation databases

    EnsemblBacteriaiACO34127; ACO34127; ACP_3506.
    GeneIDi7698868.
    KEGGiaca:ACP_3506.
    PATRICi20670209. VBIAciCap40988_3360.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP001472 Genomic DNA. Translation: ACO34127.1 .
    RefSeqi YP_002756500.1. NC_012483.1.

    3D structure databases

    ProteinModelPortali C1F736.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 240015.ACP_3506.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai ACO34127 ; ACO34127 ; ACP_3506 .
    GeneIDi 7698868.
    KEGGi aca:ACP_3506.
    PATRICi 20670209. VBIAciCap40988_3360.

    Phylogenomic databases

    eggNOGi COG3285.
    HOGENOMi HOG000222509.
    KOi K01971.
    OMAi SACDMAL.
    OrthoDBi EOG661H49.

    Enzyme and pathway databases

    BioCyci ACAP240015:GKF4-3452-MONOMER.

    Family and domain databases

    Gene3Di 2.40.50.140. 1 hit.
    InterProi IPR012309. DNA_ligase_ATP-dep_C.
    IPR012310. DNA_ligase_ATP-dep_cent.
    IPR014146. DNA_pol_LigD_ligase_dom.
    IPR014144. LigD_PE_domain.
    IPR014145. LigD_pol.
    IPR012340. NA-bd_OB-fold.
    IPR014143. NHEJ_ligase_prk.
    [Graphical view ]
    Pfami PF04679. DNA_ligase_A_C. 1 hit.
    PF01068. DNA_ligase_A_M. 1 hit.
    PF13298. LigD_N. 1 hit.
    [Graphical view ]
    SUPFAMi SSF50249. SSF50249. 1 hit.
    TIGRFAMsi TIGR02777. LigD_PE_dom. 1 hit.
    TIGR02778. ligD_pol. 1 hit.
    TIGR02779. NHEJ_ligase_lig. 1 hit.
    TIGR02776. NHEJ_ligase_prk. 1 hit.
    PROSITEi PS50160. DNA_LIGASE_A3. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: ATCC 51196 / DSM 11244 / JCM 7670Imported.

    Entry informationi

    Entry nameiC1F736_ACIC5
    AccessioniPrimary (citable) accession number: C1F736
    Entry historyi
    Integrated into UniProtKB/TrEMBL: May 26, 2009
    Last sequence update: May 26, 2009
    Last modified: October 1, 2014
    This is version 34 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteomeImported

    External Data

    Dasty 3