C1F5H1 (C1F5H1_ACIC5) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Recommended name:
Beta-galactosidase RuleBase RU000675
EC=3.2.1.23 RuleBase RU000675

Gene names

Ordered Locus Names:

ACP_1346

Organism

Acidobacterium capsulatum (strain ATCC 51196 / DSM 11244 / JCM 7670) [Complete proteome] [HAMAP]

Taxonomic identifier

240015 [NCBI]

Taxonomic lineage

Bacteria › Acidobacteria › Acidobacteriales › Acidobacteriaceae › Acidobacterium

Protein attributes

Sequence length	619 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Catalytic activity	Hydrolysis of terminal non-reducing beta-D-galactose residues in beta-D-galactosides. RuleBase RU000675
Sequence similarities	Belongs to the glycosyl hydrolase 35 family. RuleBase RU003679

Ontologies

Keywords
Molecular function	Glycosidase RuleBase RU000675 Hydrolase
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	carbohydrate metabolic process Inferred from electronic annotation. Source: InterPro
Molecular function	beta-galactosidase activity Inferred from electronic annotation. Source: EC cation binding Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	C1F5H1 [UniParc]. Last modified May 26, 2009. Version 1. Checksum: F468B3744A3223B1	FASTA	619	68,656
	10 20 30 40 50 60 MKCRYFVAAV LLSWLFAVLP LHAVPALSET HTRAAHTATV GDGHFILDGK PVQIISGSIH 70 80 90 100 110 120 FARVPRAEWG DRLRKARAMG LNAISVYVFW NVQEPHRGQW DFSGQYDVAR FIRMAQQAGL 130 140 150 160 170 180 YVILRPGPYA CAEWSMGGYP AWLWKDGRVK IRSSDPAYLH AAQDYMDHLG QQLKPLLWTH 190 200 210 220 230 240 GGPIIAVQVE NEYGSFGKSR AYLEEVRRMV AGAGLGGVVL YTADGPGLWS GSLPELPEAI 250 260 270 280 290 300 DVGPGGVENG VKQLLAYRPH SKLVYVAEYY PGWFDQWGQP HHHGAPLKEQ LKDLRWILSR 310 320 330 340 350 360 GYSVNLYMFH GGTDWGFMNG ANDNAADTDY APQTTSYDYA APLNEAGDPT PAYYAFRKLF 370 380 390 400 410 420 RQYTPGHVLP PVPALTPLIT IPAFRLPLAA SLWSDLKRPR VSASPLSFAE LGQQTGFVLY 430 440 450 460 470 480 RTEIHGPARG TLDVGEARDY DIVYLNGKRV GTLDRRLCQH AMTLDVRGAS AELDILVEDM 490 500 510 520 530 540 GRINYGPLLP DDPKGLIAPV RWNGERLTGW KNYSLPMQRV PRLSWKTQTA AGPAFHRGTF 550 560 570 580 590 600 TIEKTGDTYL NVSEIGKGLL WVNGHAIGRI WNIGPQQSDY VPACWLHKGK NTVTVLDLDS 610 EKDAEISGAA QAVYQVNAP

References

[1]

"Three genomes from the phylum Acidobacteria provide insight into the lifestyles of these microorganisms in soils." Ward N.L., Challacombe J.F., Janssen P.H., Henrissat B., Coutinho P.M., Wu M., Xie G., Haft D.H., Sait M., Badger J., Barabote R.D., Bradley B., Brettin T.S., Brinkac L.M., Bruce D., Creasy T., Daugherty S.C., Davidsen T.M. , DeBoy R.T., Detter J.C., Dodson R.J., Durkin A.S., Ganapathy A., Gwinn-Giglio M., Han C.S., Khouri H., Kiss H., Kothari S.P., Madupu R., Nelson K.E., Nelson W.C., Paulsen I., Penn K., Ren Q., Rosovitz M.J., Selengut J.D., Shrivastava S., Sullivan S.A., Tapia R., Thompson L.S., Watkins K.L., Yang Q., Yu C., Zafar N., Zhou L., Kuske C.R. Appl. Environ. Microbiol. 75:2046-2056(2009) [PubMed: 19201974] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP001472 Genomic DNA. Translation: ACO33063.1.
RefSeq	YP_002754436.1. NC_012483.1.
3D structure databases
ProteinModelPortal	C1F5H1.
ModBase	Search...
Protein-protein interaction databases
STRING	C1F5H1.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	7698164.
GenomeReviews	Gene locus ACP_1346 in contig CP001472_GR.
KEGG	aca:ACP_1346.
PATRIC	20666009. VBIAciCap40988_1295.
Organism-specific databases
CMR	Search...
Phylogenomic databases
OMA	QHETAIA.
ProtClustDB	CLSK881272.
Family and domain databases
InterPro	IPR008979. Galactose-bd-like. IPR019801. Glyco_hydro_35_CS. IPR013781. Glyco_hydro_subgr_catalytic. IPR001944. Glycoside_Hdrlase_35. IPR017853. Glycoside_hydrolase_SF. [Graphical view]
Gene3D	G3DSA:3.20.20.80. Glyco_hydro_cat. 1 hit.
KO	K12308.
PANTHER	PTHR23421. Glyco_hydro_35. 1 hit.
Pfam	PF01301. Glyco_hydro_35. 1 hit. [Graphical view]
PRINTS	PR00742. GLHYDRLASE35.
SUPFAM	SSF49785. Gal_bind_like. 1 hit. SSF51445. Glyco_hydro_cat. 1 hit.
PROSITE	PS01182. GLYCOSYL_HYDROL_F35. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

C1F5H1_ACIC5

Accession

Primary (citable) accession number: C1F5H1

Entry history

Integrated into UniProtKB/TrEMBL:	May 26, 2009
Last sequence update:	May 26, 2009
Last modified:	December 14, 2011
This is version 18 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)