Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.
Protein
Submitted name:

Putative ribosomal RNA small subunit methyltransferase B

Gene

ACP_3130

Organism
Acidobacterium capsulatum (strain ATCC 51196 / DSM 11244 / JCM 7670 / NBRC 15755 / NCIMB 13165 / 161)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein inferred from homologyi

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Molecular functioni

MethyltransferaseSAAS annotationImported, Transferase

Keywords - Ligandi

RNA-bindingSAAS annotation, S-adenosyl-L-methionineSAAS annotation

Enzyme and pathway databases

BioCyciACAP240015:GKF4-3075-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
Putative ribosomal RNA small subunit methyltransferase BImported
Gene namesi
Ordered Locus Names:ACP_3130Imported
OrganismiAcidobacterium capsulatum (strain ATCC 51196 / DSM 11244 / JCM 7670 / NBRC 15755 / NCIMB 13165 / 161)Imported
Taxonomic identifieri240015 [NCBI]
Taxonomic lineageiBacteriaAcidobacteriaAcidobacterialesAcidobacteriaceaeAcidobacterium
Proteomesi
  • UP000002207 Componenti: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi240015.ACP_3130.

Structurei

3D structure databases

ProteinModelPortaliC1F543.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini155 – 439285SAM_MT_RSMB_NOPInterPro annotationAdd
BLAST

Sequence similaritiesi

Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family.SAAS annotation

Phylogenomic databases

eggNOGiENOG4105CYJ. Bacteria.
COG0144. LUCA.
HOGENOMiHOG000037302.
KOiK03500.
OMAiLRVNRQH.
OrthoDBiEOG6091D0.

Family and domain databases

Gene3Di1.10.940.10. 1 hit.
3.40.50.150. 1 hit.
InterProiIPR001678. MeTrfase_RsmB/NOP2.
IPR006027. NusB_RsmB_TIM44.
IPR023267. RCMT.
IPR029063. SAM-dependent_MTases.
[Graphical view]
PfamiPF01189. Methyltr_RsmB-F. 1 hit.
PF01029. NusB. 1 hit.
[Graphical view]
PRINTSiPR02008. RCMTFAMILY.
SUPFAMiSSF48013. SSF48013. 1 hit.
SSF53335. SSF53335. 1 hit.
PROSITEiPS51686. SAM_MT_RSMB_NOP. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

C1F543-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MIAPARRVAF DLLQRMATSD AHSDELLRTM KVNALAAQDR NLVTTLVLGT
60 70 80 90 100
LRWQPALDQI LLQFLTRPDQ RLSEPVRAAL RLGAFQLLHL DRVPPHAVLN
110 120 130 140 150
DSVELVKLSN EAYATGLVNA VLRKVMHMPR GAGMDAAAAH PAWLAARWRR
160 170 180 190 200
HFGAEAAQAI CEYDQQASPV ALRVQSANPA EELTGEGVEC APGEWLNDAC
210 220 230 240 250
RVLRGDVART QAFAEGRVRV QDEGSQLVAE LAAAAMPEAK RVLDACAAPG
260 270 280 290 300
GKTAVLAERL AEARIVALEI SERRREQMKR NLKAYEGRVE CVAGDASALP
310 320 330 340 350
AEPEYDLILC DAPCSGTGTM ARNPEIRLRV YPEDLTRQQA RQVAILRGVA
360 370 380 390 400
GALKPGGRVV YATCSLEPEE NEDVVRAVAA RVGLRVVEMT PLVEQLAARG
410 420 430 440
VLTERGRENV LAAITNDQLR TLPGVHPCDG FFAAVLERVD
Length:440
Mass (Da):47,832
Last modified:May 26, 2009 - v1
Checksum:i8846BAFC898BA515
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP001472 Genomic DNA. Translation: ACO32938.1.
RefSeqiWP_015898176.1. NC_012483.1.

Genome annotation databases

EnsemblBacteriaiACO32938; ACO32938; ACP_3130.
KEGGiaca:ACP_3130.
PATRICi20669479. VBIAciCap40988_2998.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP001472 Genomic DNA. Translation: ACO32938.1.
RefSeqiWP_015898176.1. NC_012483.1.

3D structure databases

ProteinModelPortaliC1F543.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi240015.ACP_3130.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiACO32938; ACO32938; ACP_3130.
KEGGiaca:ACP_3130.
PATRICi20669479. VBIAciCap40988_2998.

Phylogenomic databases

eggNOGiENOG4105CYJ. Bacteria.
COG0144. LUCA.
HOGENOMiHOG000037302.
KOiK03500.
OMAiLRVNRQH.
OrthoDBiEOG6091D0.

Enzyme and pathway databases

BioCyciACAP240015:GKF4-3075-MONOMER.

Family and domain databases

Gene3Di1.10.940.10. 1 hit.
3.40.50.150. 1 hit.
InterProiIPR001678. MeTrfase_RsmB/NOP2.
IPR006027. NusB_RsmB_TIM44.
IPR023267. RCMT.
IPR029063. SAM-dependent_MTases.
[Graphical view]
PfamiPF01189. Methyltr_RsmB-F. 1 hit.
PF01029. NusB. 1 hit.
[Graphical view]
PRINTSiPR02008. RCMTFAMILY.
SUPFAMiSSF48013. SSF48013. 1 hit.
SSF53335. SSF53335. 1 hit.
PROSITEiPS51686. SAM_MT_RSMB_NOP. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC 51196 / DSM 11244 / JCM 7670 / NBRC 15755 / NCIMB 13165 / 161Imported.

Entry informationi

Entry nameiC1F543_ACIC5
AccessioniPrimary (citable) accession number: C1F543
Entry historyi
Integrated into UniProtKB/TrEMBL: May 26, 2009
Last sequence update: May 26, 2009
Last modified: May 11, 2016
This is version 46 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.