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Protein
Submitted name:

Putative ribosomal RNA small subunit methyltransferase B

Gene

ACP_3130

Organism
Acidobacterium capsulatum (strain ATCC 51196 / DSM 11244 / JCM 7670 / NBRC 15755 / NCIMB 13165 / 161)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein inferred from homologyi

Functioni

Sites

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Binding sitei269S-adenosyl-L-methioninePROSITE-ProRule annotation1
Binding sitei295S-adenosyl-L-methioninePROSITE-ProRule annotation1
Binding sitei311S-adenosyl-L-methioninePROSITE-ProRule annotation1
Active sitei364NucleophilePROSITE-ProRule annotation1

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionMethyltransferasePROSITE-ProRule annotationSAAS annotationImported, RNA-bindingPROSITE-ProRule annotationSAAS annotation, Transferase
LigandS-adenosyl-L-methioninePROSITE-ProRule annotationSAAS annotation

Names & Taxonomyi

Protein namesi
Submitted name:
Putative ribosomal RNA small subunit methyltransferase BImported
Gene namesi
Ordered Locus Names:ACP_3130Imported
OrganismiAcidobacterium capsulatum (strain ATCC 51196 / DSM 11244 / JCM 7670 / NBRC 15755 / NCIMB 13165 / 161)Imported
Taxonomic identifieri240015 [NCBI]
Taxonomic lineageiBacteriaAcidobacteriaAcidobacterialesAcidobacteriaceaeAcidobacterium
Proteomesi
  • UP000002207 Componenti: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi240015.ACP_3130.

Structurei

3D structure databases

ProteinModelPortaliC1F543.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini155 – 439SAM_MT_RSMB_NOPInterPro annotationAdd BLAST285

Sequence similaritiesi

Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family.PROSITE-ProRule annotationSAAS annotation

Phylogenomic databases

eggNOGiENOG4105CYJ. Bacteria.
COG0144. LUCA.
HOGENOMiHOG000037302.
KOiK03500.
OMAiLRVNRQH.
OrthoDBiPOG091H02E2.

Family and domain databases

Gene3Di1.10.940.10. 1 hit.
InterProiView protein in InterPro
IPR001678. MeTrfase_RsmB/NOP2.
IPR006027. NusB_RsmB_TIM44.
IPR023267. RCMT.
IPR029063. SAM-dependent_MTases.
PfamiView protein in Pfam
PF01189. Methyltr_RsmB-F. 1 hit.
PF01029. NusB. 1 hit.
PRINTSiPR02008. RCMTFAMILY.
SUPFAMiSSF48013. SSF48013. 1 hit.
SSF53335. SSF53335. 1 hit.
PROSITEiView protein in PROSITE
PS51686. SAM_MT_RSMB_NOP. 1 hit.

Sequencei

Sequence statusi: Complete.

C1F543-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MIAPARRVAF DLLQRMATSD AHSDELLRTM KVNALAAQDR NLVTTLVLGT
60 70 80 90 100
LRWQPALDQI LLQFLTRPDQ RLSEPVRAAL RLGAFQLLHL DRVPPHAVLN
110 120 130 140 150
DSVELVKLSN EAYATGLVNA VLRKVMHMPR GAGMDAAAAH PAWLAARWRR
160 170 180 190 200
HFGAEAAQAI CEYDQQASPV ALRVQSANPA EELTGEGVEC APGEWLNDAC
210 220 230 240 250
RVLRGDVART QAFAEGRVRV QDEGSQLVAE LAAAAMPEAK RVLDACAAPG
260 270 280 290 300
GKTAVLAERL AEARIVALEI SERRREQMKR NLKAYEGRVE CVAGDASALP
310 320 330 340 350
AEPEYDLILC DAPCSGTGTM ARNPEIRLRV YPEDLTRQQA RQVAILRGVA
360 370 380 390 400
GALKPGGRVV YATCSLEPEE NEDVVRAVAA RVGLRVVEMT PLVEQLAARG
410 420 430 440
VLTERGRENV LAAITNDQLR TLPGVHPCDG FFAAVLERVD
Length:440
Mass (Da):47,832
Last modified:May 26, 2009 - v1
Checksum:i8846BAFC898BA515
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP001472 Genomic DNA. Translation: ACO32938.1.
RefSeqiWP_015898176.1. NC_012483.1.

Genome annotation databases

EnsemblBacteriaiACO32938; ACO32938; ACP_3130.
KEGGiaca:ACP_3130.

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.

Entry informationi

Entry nameiC1F543_ACIC5
AccessioniPrimary (citable) accession number: C1F543
Entry historyiIntegrated into UniProtKB/TrEMBL: May 26, 2009
Last sequence update: May 26, 2009
Last modified: June 7, 2017
This is version 52 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported