C1F3Y6 (C1F3Y6_ACIC5) Unreviewed, UniProtKB/TrEMBL
Last modified
December 14, 2011.
Version 20.
History...
Names·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry infoCustomize order
Names·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry infoCustomize orderNames and origin
| Protein names | Recommended name: 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase HAMAP MF_00172 EC=2.1.1.14 HAMAP MF_00172 Alternative name(s): Cobalamin-independent methionine synthase HAMAP MF_00172 Methionine synthase, vitamin-B12 independent isozyme HAMAP MF_00172 | ||||
| Gene names |
| ||||
| Organism | Acidobacterium capsulatum (strain ATCC 51196 / DSM 11244 / JCM 7670) [Complete proteome] [HAMAP] | ||||
| Taxonomic identifier | 240015 [NCBI] | ||||
| Taxonomic lineage | Bacteria › Acidobacteria › Acidobacteriales › Acidobacteriaceae › Acidobacterium |
Protein attributes
| Sequence length | 758 AA. |
| Sequence status | Complete. |
| Protein existence | Inferred from homology |
General annotation (Comments)
| Function | Catalyzes the transfer of a methyl group from 5-methyltetrahydrofolate to homocysteine resulting in methionine formation By similarity. HAMAP MF_00172 SAAS SAAS013215 |
| Catalytic activity | 5-methyltetrahydropteroyltri-L-glutamate + L-homocysteine = tetrahydropteroyltri-L-glutamate + L-methionine. HAMAP MF_00172 SAAS SAAS013215 |
| Cofactor | Binds 1 zinc ion per subunit By similarity. HAMAP MF_00172 |
| Pathway | Amino-acid biosynthesis; L-methionine biosynthesis via de novo pathway; L-methionine from L-homocysteine (MetE route): step 1/1. HAMAP MF_00172 SAAS SAAS013215 |
| Sequence similarities | Belongs to the vitamin-B12 independent methionine synthase family. HAMAP MF_00172 |
Ontologies
| Keywords | |
|---|---|
| Biological process | Amino-acid biosynthesis Methionine biosynthesis HAMAP MF_00172 SAAS SAAS013215 |
| Domain | Repeat HAMAP MF_00172 |
| Ligand | Metal-binding HAMAP MF_00172 SAAS SAAS013215 Zinc HAMAP MF_00172 SAAS SAAS013215 |
| Molecular function | Methyltransferase HAMAP MF_00172 SAAS SAAS013215 EMBL ACO33349.1 Transferase |
| Technical term | Complete proteome |
| Gene Ontology (GO) | |
| Biological process | methionine biosynthetic process Inferred from electronic annotation. Source: HAMAP |
| Molecular function | 5-methyltetrahydropteroyltriglutamate-homocysteine S-methyltransferase activity Inferred from electronic annotation. Source: HAMAP zinc ion bindingInferred from electronic annotation. Source: InterPro |
| Complete GO annotation... | |
Sequence annotation (Features)
| Feature key | Position(s) | Length | Description | Graphical view | Feature identifier | ||||
Sites | |||||||||
|---|---|---|---|---|---|---|---|---|---|
| Metal binding | 643 | 1 | Zinc By similarity HAMAP MF_00172 | ||||||
| Metal binding | 645 | 1 | Zinc By similarity HAMAP MF_00172 | ||||||
| Metal binding | 728 | 1 | Zinc By similarity HAMAP MF_00172 | ||||||
Sequences
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References
| [1] | "Three genomes from the phylum Acidobacteria provide insight into the lifestyles of these microorganisms in soils." Ward N.L., Challacombe J.F., Janssen P.H., Henrissat B., Coutinho P.M., Wu M., Xie G., Haft D.H., Sait M., Badger J., Barabote R.D., Bradley B., Brettin T.S., Brinkac L.M., Bruce D., Creasy T., Daugherty S.C., Davidsen T.M. Kuske C.R.Appl. Environ. Microbiol. 75:2046-2056(2009) [PubMed: 19201974] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. |
Cross-references
Sequence databases | |
|---|---|
| EMBL GenBank DDBJ | CP001472 Genomic DNA. Translation: ACO33349.1. |
| RefSeq | YP_002755941.1. NC_012483.1. |
3D structure databases | |
| ProteinModelPortal | C1F3Y6. |
| ModBase | Search... |
Protein-protein interaction databases | |
| STRING | C1F3Y6. |
Protocols and materials databases | |
| StructuralBiologyKnowledgebase | Search... |
Genome annotation databases | |
| GeneID | 7700318. |
| GenomeReviews | Gene locus ACP_2931 in contig CP001472_GR. |
| KEGG | aca:ACP_2931. |
| PATRIC | 20669093. VBIAciCap40988_2805. |
Organism-specific databases | |
| CMR | Search... |
Phylogenomic databases | |
| OMA | RNIWRAN. |
| ProtClustDB | PRK05222. |
Family and domain databases | |
| HAMAP | MF_00172. Meth_synth. [Tree] |
| InterPro | IPR013215. Cbl-indep_Met_Synth_N. IPR006276. Cobalamin-indep_Met_synthase. IPR002629. Methionine_synth. [Graphical view] |
| KO | K00549. |
| Pfam | PF08267. Meth_synt_1. 1 hit. PF01717. Meth_synt_2. 1 hit. [Graphical view] |
| PIRSF | PIRSF000382. MeTrfase_B12_ind. 1 hit. |
| TIGRFAMs | TIGR01371. Met_syn_B12ind. 1 hit. |
| ProtoNet | Search... |
Entry information
| Entry name | C1F3Y6_ACIC5 | ||||||||
| Accession | Primary (citable) accession number: C1F3Y6 | ||||||||
| Entry history |
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| Entry status | Unreviewed (UniProtKB/TrEMBL) | ||||||||

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