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C1F3Y1

- RL10_ACIC5

UniProt

C1F3Y1 - RL10_ACIC5

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Protein

50S ribosomal protein L10

Gene

rplJ

Organism
Acidobacterium capsulatum (strain ATCC 51196 / DSM 11244 / JCM 7670)
Status
Reviewed - Annotation score: 2 out of 5- Protein inferred from homologyi

Functioni

Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors.UniRule annotation

GO - Molecular functioni

  1. large ribosomal subunit rRNA binding Source: UniProtKB-HAMAP

GO - Biological processi

  1. ribosome biogenesis Source: InterPro
  2. translation Source: UniProtKB-HAMAP
Complete GO annotation...

Keywords - Molecular functioni

Ribonucleoprotein, Ribosomal protein

Keywords - Ligandi

RNA-binding, rRNA-binding

Enzyme and pathway databases

BioCyciACAP240015:GKF4-2871-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
50S ribosomal protein L10UniRule annotation
Gene namesi
Name:rplJUniRule annotation
Ordered Locus Names:ACP_2926
OrganismiAcidobacterium capsulatum (strain ATCC 51196 / DSM 11244 / JCM 7670)
Taxonomic identifieri240015 [NCBI]
Taxonomic lineageiBacteriaAcidobacteriaAcidobacterialesAcidobacteriaceaeAcidobacterium
ProteomesiUP000002207: Chromosome

Subcellular locationi

GO - Cellular componenti

  1. ribosome Source: UniProtKB-KW
Complete GO annotation...

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 18118150S ribosomal protein L10PRO_1000195519Add
BLAST

Interactioni

Subunit structurei

Part of the ribosomal stalk of the 50S ribosomal subunit. The N-terminus interacts with L11 and the large rRNA to form the base of the stalk. The C-terminus forms an elongated spine to which L12 dimers bind in a sequential fashion forming a multimeric L10(L12)X complex.UniRule annotation

Protein-protein interaction databases

STRINGi240015.ACP_2926.

Family & Domainsi

Sequence similaritiesi

Belongs to the ribosomal protein L10P family.UniRule annotation

Phylogenomic databases

eggNOGiCOG0244.
HOGENOMiHOG000004852.
KOiK02864.
OMAiFSMEDPG.
OrthoDBiEOG6DNTDR.

Family and domain databases

HAMAPiMF_00362. Ribosomal_L10.
InterProiIPR022973. Ribosomal_L10.
IPR001790. Ribosomal_L10/acidic_P0.
[Graphical view]
PfamiPF00466. Ribosomal_L10. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

C1F3Y1-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MALTKARKAE RIETLAKELE HSTSAIIGTF AKLTVSQDFE LRQKVRAAGG
60 70 80 90 100
RYRVVKNKLA ARASKGTQIE AALQGLKGVS SVAYTSGDPV ALAKAMADWV
110 120 130 140 150
KENAEFTFKL GIVDGKVITV EEVDQLAKMP GKEEIFSKLL YLINAPAQRL
160 170 180
ATVMAATGRD LAVVINQGVE KGKFSGEQAS A
Length:181
Mass (Da):19,409
Last modified:May 26, 2009 - v1
Checksum:i5314C07D5D68C890
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP001472 Genomic DNA. Translation: ACO34364.1.
RefSeqiYP_002755936.1. NC_012483.1.

Genome annotation databases

EnsemblBacteriaiACO34364; ACO34364; ACP_2926.
GeneIDi7698335.
KEGGiaca:ACP_2926.
PATRICi20669083. VBIAciCap40988_2800.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP001472 Genomic DNA. Translation: ACO34364.1 .
RefSeqi YP_002755936.1. NC_012483.1.

3D structure databases

ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

STRINGi 240015.ACP_2926.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai ACO34364 ; ACO34364 ; ACP_2926 .
GeneIDi 7698335.
KEGGi aca:ACP_2926.
PATRICi 20669083. VBIAciCap40988_2800.

Phylogenomic databases

eggNOGi COG0244.
HOGENOMi HOG000004852.
KOi K02864.
OMAi FSMEDPG.
OrthoDBi EOG6DNTDR.

Enzyme and pathway databases

BioCyci ACAP240015:GKF4-2871-MONOMER.

Family and domain databases

HAMAPi MF_00362. Ribosomal_L10.
InterProi IPR022973. Ribosomal_L10.
IPR001790. Ribosomal_L10/acidic_P0.
[Graphical view ]
Pfami PF00466. Ribosomal_L10. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC 51196 / DSM 11244 / JCM 7670.

Entry informationi

Entry nameiRL10_ACIC5
AccessioniPrimary (citable) accession number: C1F3Y1
Entry historyi
Integrated into UniProtKB/Swiss-Prot: July 28, 2009
Last sequence update: May 26, 2009
Last modified: October 29, 2014
This is version 37 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Ribosomal proteins
    Ribosomal proteins families and list of entries
  2. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3