C1F3Y1 (RL10_ACIC5) Reviewed, UniProtKB/Swiss-Prot

Names and origin

Protein names

Recommended name:
50S ribosomal protein L10

Gene names

Name:	rplJ
Ordered Locus Names:	ACP_2926

Organism

Acidobacterium capsulatum (strain ATCC 51196 / DSM 11244 / JCM 7670) [Complete proteome] [HAMAP]

Taxonomic identifier

240015 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Fibrobacteres/Acidobacteria group › Acidobacteria › Acidobacteriia › Acidobacteriales › Acidobacteriaceae › Acidobacterium › Acidobacterium capsulatum

Protein attributes

Sequence length	181 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Sequence similarities

Belongs to the ribosomal protein L10P family.

Ontologies

Keywords
Molecular function	Ribonucleoprotein Ribosomal protein
Technical term	Complete proteome
Gene Ontology (GO)
Biological_process	ribosome biogenesis Inferred from electronic annotation. Source: InterPro translation Inferred from electronic annotation. Source: HAMAP
Cellular_component	ribosome Inferred from electronic annotation. Source: UniProtKB-KW
Complete GO annotation...

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Molecule processing
	Chain	1 – 181	181	50S ribosomal protein L10 HAMAP-Rule MF_00362		PRO_1000195519

Sequences

	Sequence		Length	Mass (Da)
	C1F3Y1 [UniParc]. Last modified May 26, 2009. Version 1. Checksum: 5314C07D5D68C890	FASTA	181	19,409
	10 20 30 40 50 60 MALTKARKAE RIETLAKELE HSTSAIIGTF AKLTVSQDFE LRQKVRAAGG RYRVVKNKLA 70 80 90 100 110 120 ARASKGTQIE AALQGLKGVS SVAYTSGDPV ALAKAMADWV KENAEFTFKL GIVDGKVITV 130 140 150 160 170 180 EEVDQLAKMP GKEEIFSKLL YLINAPAQRL ATVMAATGRD LAVVINQGVE KGKFSGEQAS A

References

[1]

"Three genomes from the phylum Acidobacteria provide insight into the lifestyles of these microorganisms in soils." Ward N.L., Challacombe J.F., Janssen P.H., Henrissat B., Coutinho P.M., Wu M., Xie G., Haft D.H., Sait M., Badger J., Barabote R.D., Bradley B., Brettin T.S., Brinkac L.M., Bruce D., Creasy T., Daugherty S.C., Davidsen T.M. , DeBoy R.T., Detter J.C., Dodson R.J., Durkin A.S., Ganapathy A., Gwinn-Giglio M., Han C.S., Khouri H., Kiss H., Kothari S.P., Madupu R., Nelson K.E., Nelson W.C., Paulsen I., Penn K., Ren Q., Rosovitz M.J., Selengut J.D., Shrivastava S., Sullivan S.A., Tapia R., Thompson L.S., Watkins K.L., Yang Q., Yu C., Zafar N., Zhou L., Kuske C.R. Appl. Environ. Microbiol. 75:2046-2056(2009) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: ATCC 51196 / DSM 11244 / JCM 7670.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP001472 Genomic DNA. Translation: ACO34364.1.
RefSeq	YP_002755936.1. NC_012483.1.
3D structure databases
ModBase	Search...
Protein-protein interaction databases
STRING	240015.ACP_2926.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	ACO34364; ACO34364; ACP_2926.
GeneID	7698335.
KEGG	aca:ACP_2926.
PATRIC	20669083. VBIAciCap40988_2800.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	COG0244.
HOGENOM	HOG000004852.
KO	K02864.
OMA	EGTDFEC.
ProtClustDB	PRK00099.
Enzyme and pathway databases
BioCyc	ACAP240015:GI5H-3118-MONOMER.
Family and domain databases
HAMAP	MF_00362. Ribosomal_L10.
InterPro	IPR022973. Ribosomal_L10. IPR001790. Ribosomal_L10/acidic_P0. [Graphical view]
PANTHER	PTHR11560:SF8. PTHR11560:SF8. 1 hit.
Pfam	PF00466. Ribosomal_L10. 1 hit. [Graphical view]
PROSITE	PS01109. RIBOSOMAL_L10. False negative. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

RL10_ACIC5

Accession

Primary (citable) accession number: C1F3Y1

Entry history

Integrated into UniProtKB/Swiss-Prot:	July 28, 2009
Last sequence update:	May 26, 2009
Last modified:	May 1, 2013
This is version 26 of the entry and version 1 of the sequence. [Complete history]

Entry status

Reviewed (UniProtKB/Swiss-Prot)

Annotation program

Prokaryotic Protein Annotation Program