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C1F3Y1

- RL10_ACIC5

UniProt

C1F3Y1 - RL10_ACIC5

Protein

50S ribosomal protein L10

Gene

rplJ

Organism
Acidobacterium capsulatum (strain ATCC 51196 / DSM 11244 / JCM 7670)
Status
Reviewed - Annotation score: 2 out of 5- Protein inferred from homologyi
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    • History
      Entry version 36 (01 Oct 2014)
      Sequence version 1 (26 May 2009)
      Previous versions | rss
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    Functioni

    Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors.UniRule annotation

    GO - Molecular functioni

    1. large ribosomal subunit rRNA binding Source: UniProtKB-HAMAP

    GO - Biological processi

    1. ribosome biogenesis Source: InterPro
    2. translation Source: UniProtKB-HAMAP

    Keywords - Molecular functioni

    Ribonucleoprotein, Ribosomal protein

    Keywords - Ligandi

    RNA-binding, rRNA-binding

    Enzyme and pathway databases

    BioCyciACAP240015:GKF4-2871-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    50S ribosomal protein L10UniRule annotation
    Gene namesi
    Name:rplJUniRule annotation
    Ordered Locus Names:ACP_2926
    OrganismiAcidobacterium capsulatum (strain ATCC 51196 / DSM 11244 / JCM 7670)
    Taxonomic identifieri240015 [NCBI]
    Taxonomic lineageiBacteriaAcidobacteriaAcidobacterialesAcidobacteriaceaeAcidobacterium
    ProteomesiUP000002207: Chromosome

    Subcellular locationi

    GO - Cellular componenti

    1. ribosome Source: UniProtKB-KW

    PTM / Processingi

    Molecule processing

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Chaini1 – 18118150S ribosomal protein L10PRO_1000195519Add
    BLAST

    Interactioni

    Subunit structurei

    Part of the ribosomal stalk of the 50S ribosomal subunit. The N-terminus interacts with L11 and the large rRNA to form the base of the stalk. The C-terminus forms an elongated spine to which L12 dimers bind in a sequential fashion forming a multimeric L10(L12)X complex.UniRule annotation

    Protein-protein interaction databases

    STRINGi240015.ACP_2926.

    Family & Domainsi

    Sequence similaritiesi

    Belongs to the ribosomal protein L10P family.UniRule annotation

    Phylogenomic databases

    eggNOGiCOG0244.
    HOGENOMiHOG000004852.
    KOiK02864.
    OMAiFSMEDPG.
    OrthoDBiEOG6DNTDR.

    Family and domain databases

    HAMAPiMF_00362. Ribosomal_L10.
    InterProiIPR022973. Ribosomal_L10.
    IPR001790. Ribosomal_L10/acidic_P0.
    [Graphical view]
    PfamiPF00466. Ribosomal_L10. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    C1F3Y1-1 [UniParc]FASTAAdd to Basket

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    MALTKARKAE RIETLAKELE HSTSAIIGTF AKLTVSQDFE LRQKVRAAGG    50
    RYRVVKNKLA ARASKGTQIE AALQGLKGVS SVAYTSGDPV ALAKAMADWV 100
    KENAEFTFKL GIVDGKVITV EEVDQLAKMP GKEEIFSKLL YLINAPAQRL 150
    ATVMAATGRD LAVVINQGVE KGKFSGEQAS A 181
    Length:181
    Mass (Da):19,409
    Last modified:May 26, 2009 - v1
    Checksum:i5314C07D5D68C890
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP001472 Genomic DNA. Translation: ACO34364.1.
    RefSeqiWP_015897976.1. NC_012483.1.
    YP_002755936.1. NC_012483.1.

    Genome annotation databases

    EnsemblBacteriaiACO34364; ACO34364; ACP_2926.
    GeneIDi7698335.
    KEGGiaca:ACP_2926.
    PATRICi20669083. VBIAciCap40988_2800.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP001472 Genomic DNA. Translation: ACO34364.1 .
    RefSeqi WP_015897976.1. NC_012483.1.
    YP_002755936.1. NC_012483.1.

    3D structure databases

    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 240015.ACP_2926.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai ACO34364 ; ACO34364 ; ACP_2926 .
    GeneIDi 7698335.
    KEGGi aca:ACP_2926.
    PATRICi 20669083. VBIAciCap40988_2800.

    Phylogenomic databases

    eggNOGi COG0244.
    HOGENOMi HOG000004852.
    KOi K02864.
    OMAi FSMEDPG.
    OrthoDBi EOG6DNTDR.

    Enzyme and pathway databases

    BioCyci ACAP240015:GKF4-2871-MONOMER.

    Family and domain databases

    HAMAPi MF_00362. Ribosomal_L10.
    InterProi IPR022973. Ribosomal_L10.
    IPR001790. Ribosomal_L10/acidic_P0.
    [Graphical view ]
    Pfami PF00466. Ribosomal_L10. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: ATCC 51196 / DSM 11244 / JCM 7670.

    Entry informationi

    Entry nameiRL10_ACIC5
    AccessioniPrimary (citable) accession number: C1F3Y1
    Entry historyi
    Integrated into UniProtKB/Swiss-Prot: July 28, 2009
    Last sequence update: May 26, 2009
    Last modified: October 1, 2014
    This is version 36 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiReviewed (UniProtKB/Swiss-Prot)
    Annotation programProkaryotic Protein Annotation Program

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteome

    Documents

    1. Ribosomal proteins
      Ribosomal proteins families and list of entries
    2. SIMILARITY comments
      Index of protein domains and families

    External Data

    Dasty 3