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C1F3M6 (PSD_ACIC5) Reviewed, UniProtKB/Swiss-Prot

Last modified January 25, 2012. Version 17. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (2) | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesRecommended name:
Phosphatidylserine decarboxylase proenzyme
EC=4.1.1.65

Cleaved into the following 2 chains:

  1. Phosphatidylserine decarboxylase alpha chain
  2. Phosphatidylserine decarboxylase beta chain
Gene names
Name:psd
Ordered Locus Names:ACP_1018
OrganismAcidobacterium capsulatum (strain ATCC 51196 / DSM 11244 / JCM 7670) [Complete proteome] [HAMAP]
Taxonomic identifier240015 [NCBI]
Taxonomic lineageBacteria › Acidobacteria › Acidobacteriales › Acidobacteriaceae › Acidobacterium

Protein attributes

Sequence length228 AA.
Sequence statusComplete.
Sequence processingThe displayed sequence is further processed into a mature form.
Protein existenceInferred from homology

General annotation (Comments)

Catalytic activity

Phosphatidyl-L-serine = phosphatidylethanolamine + CO2. HAMAP MF_00664

Cofactor

Pyruvoyl group By similarity. HAMAP MF_00664

Pathway

Phospholipid metabolism; phosphatidylethanolamine biosynthesis; phosphatidylethanolamine from CDP-diacylglycerol: step 2/2. HAMAP MF_00664

Sequence similarities

Belongs to the phosphatidylserine decarboxylase family. Type 3 subfamily.

Ontologies

Keywords
   Biological processPhospholipid biosynthesis
   LigandPyruvate
   Molecular functionDecarboxylase
Lyase
   PTMZymogen
   Technical termComplete proteome
Gene Ontology (GO)
   Biological processphosphatidylethanolamine biosynthetic process

Inferred from electronic annotation. Source: InterPro

   Molecular functioncofactor binding

Inferred from electronic annotation. Source: InterPro

phosphatidylserine decarboxylase activity

Inferred from electronic annotation. Source: EC

Complete GO annotation...

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Chain1 – 173173Phosphatidylserine decarboxylase beta chain By similarity
PRO_1000147621
Chain174 – 22855Phosphatidylserine decarboxylase alpha chain By similarity
PRO_1000147622

Sites

Site173 – 1742Cleavage (non-hydrolytic) By similarity

Amino acid modifications

Modified residue1741Pyruvic acid (Ser) By similarity

Sequences

Sequence LengthMass (Da)Tools
C1F3M6 [UniParc].

Last modified May 26, 2009. Version 1.
Checksum: A97E034215ADA234

FASTA22824,527
        10         20         30         40         50         60 
MVRDGYFYGL ALLVVAVIVH LLTGGWSWAV LPLLLAAFFL WFFRDPKRAI PGGEGLVVSP 

        70         80         90        100        110        120 
ADGKVTEVAR IRTPQGELQR ISIFLSVFDV HVNRSPVAGT IASVAYQKGL YLNAMDPASA 

       130        140        150        160        170        180 
KKNEQNTVVV RADAGYEITF KQIAGLLARR IVFTKRVGDR VERGQRVGLI KFGSRTDILM 

       190        200        210        220 
PPGFEILVRQ GQRVSGGSTI LARAAEGAGV LAAAPTAPGT LASTERPI

« Hide

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		CP001472 Genomic DNA. Translation: ACO32645.1.
RefSeqYP_002754124.1. NC_012483.1.

3D structure databases

ModBaseSearch...

Protein-protein interaction databases

STRINGC1F3M6.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID7700808.
GenomeReviewsGene locus ACP_1018 in contig CP001472_GR.
KEGGaca:ACP_1018.
PATRIC20665385. VBIAciCap40988_0984.

Organism-specific databases

CMRSearch...

Phylogenomic databases

OMAIFMSVFN.
ProtClustDBCLSK774759.

Family and domain databases

HAMAPMF_00664. PS_decarb_type3.
[Tree]
InterProIPR003817. PS_Dcarbxylase.
IPR004428. PtdSer_deCO2ase-related.
[Graphical view]
KOK01613.
PfamPF02666. PS_Dcarbxylase. 1 hit.
[Graphical view]
TIGRFAMsTIGR00164. PS_decarb_rel. 1 hit.
ProtoNetSearch...

Entry information

Entry namePSD_ACIC5
AccessionPrimary (citable) accession number: C1F3M6
Entry history
Integrated into UniProtKB/Swiss-Prot: July 28, 2009
Last sequence update: May 26, 2009
Last modified: January 25, 2012
This is version 17 of the entry and version 1 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Relevant documents

PATHWAY comments

Index of metabolic and biosynthesis pathways

SIMILARITY comments

Index of protein domains and families

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