C1F344 (C1F344_ACIC5) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Malate dehydrogenase (Oxaloacetate-decarboxylating) EMBL ACO32009.1
EC=1.1.1.38 EMBL ACO32009.1

Gene names

Ordered Locus Names:

ACP_2736

Organism

Acidobacterium capsulatum (strain ATCC 51196 / DSM 11244 / JCM 7670) [Complete proteome] [HAMAP]

Taxonomic identifier

240015 [NCBI]

Taxonomic lineage

Bacteria › Acidobacteria › Acidobacteriales › Acidobacteriaceae › Acidobacterium

Protein attributes

Sequence length	564 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Sequence similarities

Belongs to the malic enzymes family. RuleBase RU003427

Ontologies

Keywords
Ligand	Metal-binding RuleBase RU003427
Molecular function	Oxidoreductase RuleBase RU003427 EMBL ACO32009.1
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	malate metabolic process Inferred from electronic annotation. Source: InterPro
Molecular function	NAD binding Inferred from electronic annotation. Source: InterPro malate dehydrogenase (oxaloacetate-decarboxylating) activity Inferred from electronic annotation. Source: EC metal ion binding Inferred from electronic annotation. Source: UniProtKB-KW
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	C1F344 [UniParc]. Last modified May 26, 2009. Version 1. Checksum: 1C00F91D4BC32025	FASTA	564	62,974
	10 20 30 40 50 60 MSTSSENHPR TRKVNVAGFN LINSPRLNKG TAFTNRERDL FSLHGLLPPH VGTLEEQVDR 70 80 90 100 110 120 RMRAFDDQRT AFHQYAFLRD LQDLNETLFY ALLVRNIEKL LPIVYTPTVG EGCMRFSEIW 130 140 150 160 170 180 RKPRGVFLSY PNKDRMRQIL SHPRYDKVRC IVVSDGERIL GLGDQGAGGM GIPIGKMALY 190 200 210 220 230 240 TALGGIPPEQ CLPVLLDVGT DNEERLANPI YMGWRHARIR GLEYDDFVDA FVQCVKERWP 250 260 270 280 290 300 HVLLQWEDFA GANASRLLAR YRHQLCTFND DIQGTAAIAA ATLISAIHIT GVPLTEQRIV 310 320 330 340 350 360 LFGFGSAGLG IANLLVRLMQ QKGCTPEKAQ ERIHAIDVDG LLVEGRANIK DEQKMYARTA 370 380 390 400 410 420 ESVKGWKQEN GAIRIEEVIR QVRPTALIGV SGQAGAFTEE VVRTMAQHVE RPIIFPLSNP 430 440 450 460 470 480 TSRSEAHPHD LLTWTDGRAL VGTGSPFEPM TLRGKTLQVA QTNNSYIFPG LALGIISAKA 490 500 510 520 530 540 RHVTEDMILA ATTELILHLP TCSDSNACLL PPISEARTIA RHIGEAVGRQ ALREGQAQVA 550 560 DEAELLRALD ENHWEPAYEE YERE

References

[1]

"Three genomes from the phylum Acidobacteria provide insight into the lifestyles of these microorganisms in soils." Ward N.L., Challacombe J.F., Janssen P.H., Henrissat B., Coutinho P.M., Wu M., Xie G., Haft D.H., Sait M., Badger J., Barabote R.D., Bradley B., Brettin T.S., Brinkac L.M., Bruce D., Creasy T., Daugherty S.C., Davidsen T.M. , DeBoy R.T., Detter J.C., Dodson R.J., Durkin A.S., Ganapathy A., Gwinn-Giglio M., Han C.S., Khouri H., Kiss H., Kothari S.P., Madupu R., Nelson K.E., Nelson W.C., Paulsen I., Penn K., Ren Q., Rosovitz M.J., Selengut J.D., Shrivastava S., Sullivan S.A., Tapia R., Thompson L.S., Watkins K.L., Yang Q., Yu C., Zafar N., Zhou L., Kuske C.R. Appl. Environ. Microbiol. 75:2046-2056(2009) [PubMed: 19201974] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP001472 Genomic DNA. Translation: ACO32009.1.
RefSeq	YP_002755756.1. NC_012483.1.
3D structure databases
ProteinModelPortal	C1F344.
ModBase	Search...
Protein-protein interaction databases
STRING	C1F344.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	7698649.
GenomeReviews	Gene locus ACP_2736 in contig CP001472_GR.
KEGG	aca:ACP_2736.
PATRIC	20668709. VBIAciCap40988_2618.
Organism-specific databases
CMR	Search...
Phylogenomic databases
OMA	QDNNETL.
ProtClustDB	PRK13529.
Family and domain databases
InterPro	IPR015884. Malic_enzyme_CS. IPR012301. Malic_N. IPR012302. Malic_NAD-bd. IPR001891. Malic_OxRdtase. IPR016040. NAD(P)-bd_dom. [Graphical view]
Gene3D	G3DSA:3.40.50.10380. G3DSA:3.40.50.10380. 1 hit. G3DSA:3.40.50.720. NAD(P)-bd. 1 hit.
KO	K00027.
Pfam	PF00390. malic. 1 hit. PF03949. Malic_M. 1 hit. [Graphical view]
PIRSF	PIRSF000106. ME. 1 hit.
PRINTS	PR00072. MALOXRDTASE.
SMART	SM00919. Malic_M. 1 hit. [Graphical view]
PROSITE	PS00331. MALIC_ENZYMES. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

C1F344_ACIC5

Accession

Primary (citable) accession number: C1F344

Entry history

Integrated into UniProtKB/TrEMBL:	May 26, 2009
Last sequence update:	May 26, 2009
Last modified:	December 14, 2011
This is version 21 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)