C1F306 (C1F306_ACIC5) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Xylann 1,4-beta-xylosidase EMBL ACO32242.1
EC=3.2.1.37 EMBL ACO32242.1

Gene names

Name:	xynB EMBL ACO32242.1
Ordered Locus Names:	ACP_0908

Organism

Acidobacterium capsulatum (strain ATCC 51196 / DSM 11244 / JCM 7670) [Complete proteome] [HAMAP]

Taxonomic identifier

240015 [NCBI]

Taxonomic lineage

Bacteria › Acidobacteria › Acidobacteriales › Acidobacteriaceae › Acidobacterium

Protein attributes

Sequence length	522 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Molecular function	Glycosidase EMBL ACO32242.1 Hydrolase
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	carbohydrate metabolic process Inferred from electronic annotation. Source: InterPro
Molecular function	cation binding Inferred from electronic annotation. Source: InterPro xylan 1,4-beta-xylosidase activity Inferred from electronic annotation. Source: EC
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	C1F306 [UniParc]. Last modified May 26, 2009. Version 1. Checksum: CB1C44A71C257DB3	FASTA	522	58,414
	10 20 30 40 50 60 MAVTFAAHAV AQSPSHQPRV ITANVQAAAG PVNRFFDFSV GSDYSGTLIK ADSQNQLQMV 70 80 90 100 110 120 TDELGFRYIR FHAIFHDALG TVQQKNGKIV YNWTGIDELY DNLLARHIKP FVELSFTPQA 130 140 150 160 170 180 LATSKNSIFY YHANTSHPNP KEWRNLIAAF ARHLEKRYGK AEVRSWYFEV WNEPNLSGFW 190 200 210 220 230 240 EGGDQKAYFQ LYDLTARTLK SVDRQLRVGG PATAGAAWIP AFLDYVKKTH APIDFVTTHT 250 260 270 280 290 300 YGVKGGFLDP DGKDDLLLDP SPNAIVGDVR RVHQQIAASP FPHLPLYITE WSTSYTPADP 310 320 330 340 350 360 VHDSYISAAY ILNKLKATQG LAQGMSYWTY SDLFEESGPP PAAFYGGFGL VTRDGIRKPA 370 380 390 400 410 420 FFAYKYLHAL RGETIPSSDP QSMLSTNGQN FTAVLWDFQT PAQGKLGDRE FYTRLLPDHA 430 440 450 460 470 480 AAPVDLTVTH LTPGTLYRLQ LHRTGYGVND AYSEYLRMGA PKNLTQPQIA HLDYLTRDQP 490 500 510 520 ERNQLLRAGS DGTIALHIPM RTNGIVLVTL RRVYSASPNP RH

References

[1]

"Three genomes from the phylum Acidobacteria provide insight into the lifestyles of these microorganisms in soils." Ward N.L., Challacombe J.F., Janssen P.H., Henrissat B., Coutinho P.M., Wu M., Xie G., Haft D.H., Sait M., Badger J., Barabote R.D., Bradley B., Brettin T.S., Brinkac L.M., Bruce D., Creasy T., Daugherty S.C., Davidsen T.M. , DeBoy R.T., Detter J.C., Dodson R.J., Durkin A.S., Ganapathy A., Gwinn-Giglio M., Han C.S., Khouri H., Kiss H., Kothari S.P., Madupu R., Nelson K.E., Nelson W.C., Paulsen I., Penn K., Ren Q., Rosovitz M.J., Selengut J.D., Shrivastava S., Sullivan S.A., Tapia R., Thompson L.S., Watkins K.L., Yang Q., Yu C., Zafar N., Zhou L., Kuske C.R. Appl. Environ. Microbiol. 75:2046-2056(2009) [PubMed: 19201974] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP001472 Genomic DNA. Translation: ACO32242.1.
RefSeq	YP_002754018.1. NC_012483.1.
3D structure databases
ProteinModelPortal	C1F306.
ModBase	Search...
Protein-protein interaction databases
STRING	C1F306.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	7699053.
GenomeReviews	Gene locus ACP_0908 in contig CP001472_GR.
KEGG	aca:ACP_0908.
PATRIC	20665165. VBIAciCap40988_0875.
Organism-specific databases
CMR	Search...
Phylogenomic databases
OMA	TEWSSSY.
ProtClustDB	CLSK872918.
Family and domain databases
InterPro	IPR000514. Glyco_hydro_39. IPR013781. Glyco_hydro_subgr_catalytic. IPR017853. Glycoside_hydrolase_SF. [Graphical view]
Gene3D	G3DSA:3.20.20.80. Glyco_hydro_cat. 1 hit.
KO	K01198.
Pfam	PF01229. Glyco_hydro_39. 1 hit. [Graphical view]
PRINTS	PR00745. GLHYDRLASE39.
SUPFAM	SSF51445. Glyco_hydro_cat. 1 hit.
PROSITE	PS01027. GLYCOSYL_HYDROL_F39. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

C1F306_ACIC5

Accession

Primary (citable) accession number: C1F306

Entry history

Integrated into UniProtKB/TrEMBL:	May 26, 2009
Last sequence update:	May 26, 2009
Last modified:	December 14, 2011
This is version 16 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)