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Protein
Submitted name:

Ricin-type beta-trefoil lectin domain protein

Gene

ACP_0871

Organism
Acidobacterium capsulatum (strain ATCC 51196 / DSM 11244 / JCM 7670 / NBRC 15755 / NCIMB 13165 / 161)
Status
Unreviewed-Annotation score: -Protein predictedi

Functioni

GO - Molecular functioni

Keywordsi

LigandLectinImported

Protein family/group databases

CAZyiCBM13 Carbohydrate-Binding Module Family 13
GH51 Glycoside Hydrolase Family 51

Names & Taxonomyi

Protein namesi
Submitted name:
Ricin-type beta-trefoil lectin domain proteinImported
Gene namesi
Ordered Locus Names:ACP_0871Imported
OrganismiAcidobacterium capsulatum (strain ATCC 51196 / DSM 11244 / JCM 7670 / NBRC 15755 / NCIMB 13165 / 161)Imported
Taxonomic identifieri240015 [NCBI]
Taxonomic lineageiBacteriaAcidobacteriaAcidobacterialesAcidobacteriaceaeAcidobacterium
Proteomesi
  • UP000002207 Componenti: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi240015.ACP_0871

Structurei

3D structure databases

ProteinModelPortaliC1F2X0
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini500 – 644Ricin B-type lectinInterPro annotationAdd BLAST145

Phylogenomic databases

eggNOGiENOG4108MTH Bacteria
ENOG4110E9C LUCA
HOGENOMiHOG000097289
OrthoDBiPOG091H03M1

Family and domain databases

CDDicd00161 RICIN, 1 hit
Gene3Di2.60.40.1180, 1 hit
InterProiView protein in InterPro
IPR013780 Glyco_hydro_b
IPR017853 Glycoside_hydrolase_SF
IPR035992 Ricin_B-like_lectins
IPR000772 Ricin_B_lectin
PfamiView protein in Pfam
PF14200 RicinB_lectin_2, 2 hits
SUPFAMiSSF50370 SSF50370, 1 hit
SSF51445 SSF51445, 1 hit
PROSITEiView protein in PROSITE
PS50231 RICIN_B_LECTIN, 1 hit

Sequencei

Sequence statusi: Complete.

C1F2X0-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MSRTTSHSSQ QSTRRHFLHM QLLGSILLCS LFVAVPVKAQ TTASVSINAY
60 70 80 90 100
SEMGSVPSQG YGVDSSVYDG YMTNPGLGTA LKTGGFNAIR YPGGSYADIF
110 120 130 140 150
NFLSGTDQSL NNGGYFAPGD TFNNWISDLI QPSGAKGVIT VNYGSNQNND
160 170 180 190 200
GPAPPSEAAS WVQYANITNN YGILYWEIGN EIYGNGYYTS GNWEYDLHDL
210 220 230 240 250
DQTTADRVGN PALSPTAYGT NAAAFIKAMK AVDPNIKCGV FVSTSPWVPG
260 270 280 290 300
WDQDVLTAVS NALQGTGYTL DFVILHWYPS GTDAQVLASP PTINSQVAQV
310 320 330 340 350
RADIQKYYTL GNANQLQLLV TETAANSNGG LFPYLFTTDE FLTWFEQSAS
360 370 380 390 400
NVEYQELNSG VFENSSTNTP IGPWYGVQFD SMIARPGDRM VAASSSNSLL
410 420 430 440 450
HVHAVRRSDG QMGVVLINDD PSNSTTVSVN VSGETLASSG TKYTFGNSNF
460 470 480 490 500
SPGSETPNSG ISSSSTSGVG NNFSITVPAY STVALVIPQT STNTANLIAN
510 520 530 540 550
GNYVITNYQT GLALDDYAFS KTAGSSLDMW PVTGGSNQSW TVTNLGNNYI
560 570 580 590 600
YLTSAYSGLA MDVYQGSNSP GAKIDQWPWS NTSNQIWRVV SMGNGNYELL
610 620 630 640
SQRSGLALGI PAAATGSGSS SLLNGTGLDQ ETITGAAGQL WTFNN
Length:645
Mass (Da):68,607
Last modified:May 26, 2009 - v1
Checksum:i65561022CF8EA6F7
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP001472 Genomic DNA Translation: ACO32851.1

Genome annotation databases

EnsemblBacteriaiACO32851; ACO32851; ACP_0871
KEGGiaca:ACP_0871

Entry informationi

Entry nameiC1F2X0_ACIC5
AccessioniPrimary (citable) accession number: C1F2X0
Entry historyiIntegrated into UniProtKB/TrEMBL: May 26, 2009
Last sequence update: May 26, 2009
Last modified: February 28, 2018
This is version 51 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

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