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C1F2J2 (C1F2J2_ACIC5) Unreviewed, UniProtKB/TrEMBL

Last modified November 13, 2013. Version 36. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Protein attributes

Sequence length540 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Catalytic activity

ATP + (deoxyribonucleotide)(n) + (deoxyribonucleotide)(m) = AMP + diphosphate + (deoxyribonucleotide)(n+m).

Sequence similarities

Belongs to the ATP-dependent DNA ligase family. RuleBase RU004196

Sequences

Sequence LengthMass (Da)Tools
C1F2J2 [UniParc].

Last modified May 26, 2009. Version 1.
Checksum: A930EDCDC1CC8371

FASTA54058,916
        10         20         30         40         50         60 
MTRPAPQTSA PFDAFARCND ALAATPGKLA RREILVAYLR PLAVPDAARA ASSVPPTLTL 

        70         80         90        100        110        120 
ADVEQAFAQI AAARGPAPRL QRVRQLLACA TPLEIKYLIK LMLGDLRTGV KQALVEEAIA 

       130        140        150        160        170        180 
QLHEVELPTL RRALMLNGSL PEVVAMAAAH TLPQAQMRLF HPLGFMLASP VAGVEEAMAR 

       190        200        210        220        230        240 
FASKPDARQA SEPPTAIQIE DKYDGIRAQL HCGDPAQPGR VTLFSRNRED IGISFPELIE 

       250        260        270        280        290        300 
AFAAMPEPVV LDGEILAWQP ASATGAARAM PFAALTQRLG RKRVTAQMRD QIPVVFMAFD 

       310        320        330        340        350        360 
LLARHGELLL DQPLSSRRQQ LEAFLAAASP LALPAGAAQS SLFAAEESAD FLRLKLAPAT 

       370        380        390        400        410        420 
QLESAAQLDR AYQDARARGN EGVMLKALAS PYQPGRRGLA WLKLKRELAT LDVVVTGAEF 

       430        440        450        460        470        480 
GHGKRAHVLS DYTFAVRDGE ELKNIGKAYS GLTDAEIAAN TKFLKEHTLE DFGHFRSVEP 

       490        500        510        520        530        540 
LLVLEVAFNN IQRSERHNSG FALRFPRIVR IRDDKPVEEI DTLARVEELY QSQPDKPPEA 

« Hide

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP001472 Genomic DNA. Translation: ACO33334.1.
RefSeqYP_002755673.1. NC_012483.1.

3D structure databases

ProteinModelPortalC1F2J2.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING240015.ACP_2652.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaACO33334; ACO33334; ACP_2652.
GeneID7697955.
KEGGaca:ACP_2652.
PATRIC20668547. VBIAciCap40988_2537.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG1793.
HOGENOMHOG000036008.
KOK01971.
OMANPVESRY.
OrthoDBEOG6Q8HXT.
ProtClustDBCLSK2467850.

Enzyme and pathway databases

BioCycACAP240015:GKF4-2601-MONOMER.

Family and domain databases

Gene3D1.10.3260.10. 1 hit.
2.40.50.140. 1 hit.
InterProIPR000977. DNA_ligase_ATP-dep.
IPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR016059. DNA_ligase_ATP-dep_CS.
IPR012308. DNA_ligase_ATP-dep_N.
IPR012340. NA-bd_OB-fold.
[Graphical view]
PfamPF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
PF04675. DNA_ligase_A_N. 1 hit.
[Graphical view]
SUPFAMSSF117018. SSF117018. 1 hit.
SSF50249. SSF50249. 1 hit.
TIGRFAMsTIGR00574. dnl1. 1 hit.
PROSITEPS00697. DNA_LIGASE_A1. 1 hit.
PS00333. DNA_LIGASE_A2. 1 hit.
PS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameC1F2J2_ACIC5
AccessionPrimary (citable) accession number: C1F2J2
Entry history
Integrated into UniProtKB/TrEMBL: May 26, 2009
Last sequence update: May 26, 2009
Last modified: November 13, 2013
This is version 36 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)