C1F126 (C1F126_ACIC5) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Recommended name:
Glycogen synthase HAMAP MF_00484
EC=2.4.1.21 HAMAP MF_00484

Alternative name(s):
Starch [bacterial glycogen] synthase HAMAP MF_00484

Gene names

Name:	glgA HAMAP MF_00484
Ordered Locus Names:	ACP_0526

Organism

Acidobacterium capsulatum (strain ATCC 51196 / DSM 11244 / JCM 7670) [Complete proteome] [HAMAP]

Taxonomic identifier

240015 [NCBI]

Taxonomic lineage

Bacteria › Acidobacteria › Acidobacteriales › Acidobacteriaceae › Acidobacterium

Protein attributes

Sequence length	484 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Function	Synthesizes alpha-1,4-glucan chains using ADP-glucose By similarity. HAMAP MF_00484 SAAS SAAS011835
Catalytic activity	ADP-glucose + (1,4-alpha-D-glucosyl)(n) = ADP + (1,4-alpha-D-glucosyl)(n+1). HAMAP MF_00484
Pathway	Glycan biosynthesis; glycogen biosynthesis. HAMAP MF_00484 SAAS SAAS011835
Sequence similarities	Belongs to the glycosyltransferase 1 family. Bacterial/plant glycogen synthase subfamily. HAMAP MF_00484

Ontologies

Keywords
Biological process	Glycogen biosynthesis HAMAP MF_00484 SAAS SAAS011835
Molecular function	Glycosyltransferase HAMAP MF_00484 SAAS SAAS011835 Transferase
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	glycogen biosynthetic process Inferred from electronic annotation. Source: HAMAP
Molecular function	starch synthase activity Inferred from electronic annotation. Source: HAMAP
Complete GO annotation...

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Sites
	Binding site	15	1	ADP-glucose By similarity HAMAP MF_00484

Sequences

	Sequence		Length	Mass (Da)
	C1F126 [UniParc]. Last modified May 26, 2009. Version 1. Checksum: AA1E53D43FEB244C	FASTA	484	54,552
	10 20 30 40 50 60 MHIVFAAPEC VPFAKTGGLA DVVGALPQQL VRMGHQVTVY LPYYRQIAVK TPEKIYAIRS 70 80 90 100 110 120 LTIPFQYYNH FVGVLDGGER DGVRYYFVEC PELFDREFLY GSPSGDYLDN WERFGLFARA 130 140 150 160 170 180 VLEASKLLGV PDVFHVHDWQ TGMLPVYLRT TYATDPMLFR AGVVMTVHNA GYQTYFPPQT 190 200 210 220 230 240 TEKLLLPWDT FHMDRLEHYD TLNFLKGGIV YSDAITTVSK RYAQEIQTPE FGFSLEGVFE 250 260 270 280 290 300 RRAADLHGIL NGVDYSDWDP SHDGYIAAHY TPEKLEAKQL CRKDLLHAFG APSLAENIPV 310 320 330 340 350 360 LSIVSRFATQ KGFDILADAA DRLLAKDVVL IVLGTGEPYY ENIFREMQNH HPGKVFVKVA 370 380 390 400 410 420 YDNALAHKVE AGGDLFLMPS RYEPCGLNQI YSLRYGNVPV VHATGGLDDT IQPWNGAEKS 430 440 450 460 470 480 GTGFKFHDYS ADALLGSIDE ALAVFADKAA WQTLMRNGMA QDYSWTKPAQ EYEALYNEVA RRRS

References

[1]

"Three genomes from the phylum Acidobacteria provide insight into the lifestyles of these microorganisms in soils." Ward N.L., Challacombe J.F., Janssen P.H., Henrissat B., Coutinho P.M., Wu M., Xie G., Haft D.H., Sait M., Badger J., Barabote R.D., Bradley B., Brettin T.S., Brinkac L.M., Bruce D., Creasy T., Daugherty S.C., Davidsen T.M. , DeBoy R.T., Detter J.C., Dodson R.J., Durkin A.S., Ganapathy A., Gwinn-Giglio M., Han C.S., Khouri H., Kiss H., Kothari S.P., Madupu R., Nelson K.E., Nelson W.C., Paulsen I., Penn K., Ren Q., Rosovitz M.J., Selengut J.D., Shrivastava S., Sullivan S.A., Tapia R., Thompson L.S., Watkins K.L., Yang Q., Yu C., Zafar N., Zhou L., Kuske C.R. Appl. Environ. Microbiol. 75:2046-2056(2009) [PubMed: 19201974] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP001472 Genomic DNA. Translation: ACO34540.1.
RefSeq	YP_002753660.1. NC_012483.1.
3D structure databases
ModBase	Search...
Protein-protein interaction databases
STRING	C1F126.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	7699081.
GenomeReviews	Gene locus ACP_0526 in contig CP001472_GR.
KEGG	aca:ACP_0526.
PATRIC	20664423. VBIAciCap40988_0508.
Organism-specific databases
CMR	Search...
Phylogenomic databases
OMA	PIVHEIG.
ProtClustDB	PRK00654.
Family and domain databases
HAMAP	MF_00484. Glycogen_synth. [Tree]
InterPro	IPR001296. Glyco_trans_1. IPR011835. Glycogen/starch_synth. IPR013534. Starch_synth_cat_dom. [Graphical view]
KO	K00703.
Pfam	PF08323. Glyco_transf_5. 1 hit. PF00534. Glycos_transf_1. 1 hit. [Graphical view]
TIGRFAMs	TIGR02095. GlgA. 1 hit.
ProtoNet	Search...

Entry information

Entry name

C1F126_ACIC5

Accession

Primary (citable) accession number: C1F126

Entry history

Integrated into UniProtKB/TrEMBL:	May 26, 2009
Last sequence update:	May 26, 2009
Last modified:	December 14, 2011
This is version 20 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)