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C1EMD1 (C1EMD1_BACC3) Unreviewed, UniProtKB/TrEMBL

Last modified May 14, 2014. Version 37. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·Ontologies·Sequences·References·Cross-refs·Entry infoCustomize order

Names and origin

Protein names
EC=3.2.1.1 EMBL ACO27732.1
Gene names
Name:amyS EMBL ACO27732.1
Ordered Locus Names:BCA_3570 EMBL ACO27732.1
OrganismBacillus cereus (strain 03BB102) [Complete proteome] [HAMAP] EMBL ACO27732.1
Taxonomic identifier572264 [NCBI]
Taxonomic lineageBacteriaFirmicutesBacilliBacillalesBacillaceaeBacillusBacillus cereus group

Protein attributes

Sequence length513 AA.
Sequence statusComplete.
Protein existencePredicted

Ontologies

Keywords
   Molecular functionGlycosidase EMBL ACO27732.1
Hydrolase
   Technical termComplete proteome
Gene Ontology (GO)
   Biological_processcarbohydrate metabolic process

Inferred from electronic annotation. Source: InterPro

   Molecular_functionalpha-amylase activity

Inferred from electronic annotation. Source: UniProtKB-EC

calcium ion binding

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
C1EMD1 [UniParc].

Last modified May 26, 2009. Version 1.
Checksum: 3F3F61B379DDEDA7

FASTA51358,297
        10         20         30         40         50         60 
MFKKIAIVGF SVVLFLPSIY GGSKVYADTV NNGTLMQYFE WYAPNDGNHW NRLHSDAENL 

        70         80         90        100        110        120 
AQKGITSVWI PPAYKGTTQN DVGYGAYDLY DLGEFNQKGT VRTKYGTKAQ LKSAIEALHK 

       130        140        150        160        170        180 
QNIDVYGDVV MNHKGGADYT ETVTAVEVDR NNRNIEVSGD YEINAWTGFN FPGRGDAYSN 

       190        200        210        220        230        240 
FKWKWYHFDG TDWDEGRKLN RIYKFRGIGK AWDWEVSSEN GNYDYLMYAD LDFDHPDVAN 

       250        260        270        280        290        300 
EMKNWGTWYA NELNLDGFRL DAVKHIDHEY LRDWVNHVRQ QTGKEMFTVA EYWQNDIQTL 

       310        320        330        340        350        360 
NNYLAKVNYN QSVFDAPLHY NFHYASKGNG NYDMRNILNG TVMQNHPALA VTLVENHDSQ 

       370        380        390        400        410        420 
PGQSLESVVS PWFKPLAYAF ILTRAEGYPS VFYGDYYGTS GNSSYEIPAL KDKIDPILMA 

       430        440        450        460        470        480 
RKNFAYGTQR DYLDHPDVIG WTREGDGVHA DSGLATLISD GPGGSKWMEV GKNNAGEVWY 

       490        500        510 
DMTGNQTNTV TINKDGWGQF HVSGGSVSIY VQQ 

« Hide

References

[1]"Genome sequence of Bacillus cereus 03BB102."
Dodson R.J., Jackson P., Munk A.C., Brettin T., Bruce D., Detter C., Tapia R., Han C., Sutton G., Sims D.
Submitted (FEB-2009) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: 03BB102 EMBL ACO27732.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP001407 Genomic DNA. Translation: ACO27732.1.
RefSeqYP_002750837.1. NC_012472.1.

3D structure databases

ProteinModelPortalC1EMD1.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING572264.BCA_3570.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaACO27732; ACO27732; BCA_3570.
GeneID7692646.
KEGGbcx:BCA_3570.
PATRIC18820303. VBIBacCer84800_3468.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG0366.
HOGENOMHOG000094847.
KOK01176.
OMATWITNEL.
OrthoDBEOG65QWH3.

Enzyme and pathway databases

BioCycBCER572264:GH22-3520-MONOMER.

Family and domain databases

Gene3D2.60.40.1180. 1 hit.
3.20.20.80. 1 hit.
InterProIPR013776. A-amylase_thermo.
IPR015237. Alpha-amylase_C_pro.
IPR015902. Glyco_hydro_13.
IPR013780. Glyco_hydro_13_b.
IPR006047. Glyco_hydro_13_cat_dom.
IPR006589. Glyco_hydro_13_sub_cat_dom.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view]
PANTHERPTHR10357. PTHR10357. 1 hit.
PfamPF00128. Alpha-amylase. 1 hit.
PF09154. DUF1939. 1 hit.
[Graphical view]
PIRSFPIRSF001021. Alph-amls_thrmst. 1 hit.
SMARTSM00642. Aamy. 1 hit.
[Graphical view]
SUPFAMSSF51445. SSF51445. 1 hit.
ProtoNetSearch...

Entry information

Entry nameC1EMD1_BACC3
AccessionPrimary (citable) accession number: C1EMD1
Entry history
Integrated into UniProtKB/TrEMBL: May 26, 2009
Last sequence update: May 26, 2009
Last modified: May 14, 2014
This is version 37 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)