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C1EGI4 (C1EGI4_MICSR) Unreviewed, UniProtKB/TrEMBL

Last modified July 9, 2014. Version 25. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesRecommended name:
Alpha-amylase RuleBase RU361134

EC=3.2.1.1 RuleBase RU361134
Gene names
Name:AMY1 EMBL ACO67331.1
ORF Names:MICPUN_96728 EMBL ACO67331.1
OrganismMicromonas sp. (strain RCC299 / NOUM17) (Picoplanktonic green alga) [Complete proteome]
Taxonomic identifier296587 [NCBI]
Taxonomic lineageEukaryotaViridiplantaeChlorophytaMamiellophyceaeMamiellalesMicromonas

Protein attributes

Sequence length447 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Catalytic activity

Endohydrolysis of (1->4)-alpha-D-glucosidic linkages in polysaccharides containing three or more (1->4)-alpha-linked D-glucose units. RuleBase RU361134

Sequence similarities

Belongs to the glycosyl hydrolase 13 family. RuleBase RU003615

Ontologies

Keywords
   Biological processCarbohydrate metabolism RuleBase RU361134
   Molecular functionGlycosidase RuleBase RU361134
Hydrolase
   Technical termComplete proteome
Gene Ontology (GO)
   Biological_processcarbohydrate metabolic process

Inferred from electronic annotation. Source: InterPro

   Molecular_functionalpha-amylase activity

Inferred from electronic annotation. Source: InterPro

calcium ion binding

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
C1EGI4 [UniParc].

Last modified May 26, 2009. Version 1.
Checksum: 3C78478D57632686

FASTA44750,076
        10         20         30         40         50         60 
MVPDIAATGV THLWLPPPSH SVSPEGYLPR HLWNLDSSEY GDQNELVALN ASLREAGIMP 

        70         80         90        100        110        120 
VCDVVINHRT ADEIGPEGVY NVYSDEVDHT GTAVHWGRHM ITCNDPAFHG SGHEDSGDNY 

       130        140        150        160        170        180 
DAAPDLDHAN DELRATLKRW LRWLRWDVGF GGFRFDFVRG YAPEYTEEYV KETTSRGDFC 

       190        200        210        220        230        240 
VGENWVDLAW EGSHLNYNQD GPRGKLVEWL AATHGTCALF DFPTKGILQR AVTHVEFYRL 

       250        260        270        280        290        300 
RDPASRPPGL SGWIPSRAVT FVDNHDTGAP QNHWPFPPDR IALGYAYVLT HPGIPCVFGP 

       310        320        330        340        350        360 
HLWGDDPVLS GVIRLLIDLR KRCCVCADAP VKIQMAENDI YVAKVGHRLT VKLGPRYEMP 

       370        380        390        400        410        420 
VELIPKEPEW SLAVAGEDYA VWERVQYDTD ADAKVVAMER EMMDVGDDGE YYPLERVPVD 

       430        440 
NSRQSIGSWI EPPPGIVEPS DGEADPR 

« Hide

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP001332 Genomic DNA. Translation: ACO67331.1.
RefSeqXP_002506073.1. XM_002506027.1.

3D structure databases

ProteinModelPortalC1EGI4.
ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID8248806.
KEGGmis:MICPUN_96728.

Phylogenomic databases

HOGENOMHOG000239525.
KOK01176.

Family and domain databases

Gene3D2.60.40.1180. 1 hit.
3.20.20.80. 1 hit.
InterProIPR012850. A-amylase_bs_C.
IPR006046. Alpha_amylase.
IPR015902. Glyco_hydro_13.
IPR013780. Glyco_hydro_13_b.
IPR006047. Glyco_hydro_13_cat_dom.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view]
PANTHERPTHR10357. PTHR10357. 1 hit.
PfamPF07821. Alpha-amyl_C2. 1 hit.
PF00128. Alpha-amylase. 1 hit.
[Graphical view]
PRINTSPR00110. ALPHAAMYLASE.
SMARTSM00810. Alpha-amyl_C2. 1 hit.
[Graphical view]
SUPFAMSSF51445. SSF51445. 1 hit.
ProtoNetSearch...

Entry information

Entry nameC1EGI4_MICSR
AccessionPrimary (citable) accession number: C1EGI4
Entry history
Integrated into UniProtKB/TrEMBL: May 26, 2009
Last sequence update: May 26, 2009
Last modified: July 9, 2014
This is version 25 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)