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C1EGI4

- C1EGI4_MICSR

UniProt

C1EGI4 - C1EGI4_MICSR

Protein

Alpha-amylase

Gene

AMY1

Organism
Micromonas sp. (strain RCC299 / NOUM17) (Picoplanktonic green alga)
Status
Unreviewed - Annotation score: 2 out of 5- Protein inferred from homologyi
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    • History
      Entry version 26 (01 Oct 2014)
      Sequence version 1 (26 May 2009)
      Previous versions | rss
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    Functioni

    Catalytic activityi

    Endohydrolysis of (1->4)-alpha-D-glucosidic linkages in polysaccharides containing three or more (1->4)-alpha-linked D-glucose units.UniRule annotation

    GO - Molecular functioni

    1. alpha-amylase activity Source: UniProtKB-EC
    2. calcium ion binding Source: InterPro

    GO - Biological processi

    1. carbohydrate metabolic process Source: UniProtKB-KW

    Keywords - Molecular functioni

    GlycosidaseUniRule annotation, Hydrolase

    Keywords - Biological processi

    Carbohydrate metabolismUniRule annotation

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    Alpha-amylaseUniRule annotation (EC:3.2.1.1UniRule annotation)
    Gene namesi
    Name:AMY1Imported
    ORF Names:MICPUN_96728Imported
    OrganismiMicromonas sp. (strain RCC299 / NOUM17) (Picoplanktonic green alga)Imported
    Taxonomic identifieri296587 [NCBI]
    Taxonomic lineageiEukaryotaViridiplantaeChlorophytaMamiellophyceaeMamiellalesMicromonas
    ProteomesiUP000002009: Chromosome 14

    Structurei

    3D structure databases

    ProteinModelPortaliC1EGI4.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Sequence similaritiesi

    Belongs to the glycosyl hydrolase 13 family.UniRule annotation

    Phylogenomic databases

    HOGENOMiHOG000239525.
    KOiK01176.

    Family and domain databases

    Gene3Di2.60.40.1180. 1 hit.
    3.20.20.80. 1 hit.
    InterProiIPR012850. A-amylase_bs_C.
    IPR006046. Alpha_amylase.
    IPR015902. Glyco_hydro_13.
    IPR013780. Glyco_hydro_13_b.
    IPR006047. Glyco_hydro_13_cat_dom.
    IPR013781. Glyco_hydro_catalytic_dom.
    IPR017853. Glycoside_hydrolase_SF.
    [Graphical view]
    PANTHERiPTHR10357. PTHR10357. 1 hit.
    PfamiPF07821. Alpha-amyl_C2. 1 hit.
    PF00128. Alpha-amylase. 1 hit.
    [Graphical view]
    PRINTSiPR00110. ALPHAAMYLASE.
    SMARTiSM00810. Alpha-amyl_C2. 1 hit.
    [Graphical view]
    SUPFAMiSSF51445. SSF51445. 1 hit.

    Sequencei

    Sequence statusi: Complete.

    C1EGI4-1 [UniParc]FASTAAdd to Basket

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    MVPDIAATGV THLWLPPPSH SVSPEGYLPR HLWNLDSSEY GDQNELVALN    50
    ASLREAGIMP VCDVVINHRT ADEIGPEGVY NVYSDEVDHT GTAVHWGRHM 100
    ITCNDPAFHG SGHEDSGDNY DAAPDLDHAN DELRATLKRW LRWLRWDVGF 150
    GGFRFDFVRG YAPEYTEEYV KETTSRGDFC VGENWVDLAW EGSHLNYNQD 200
    GPRGKLVEWL AATHGTCALF DFPTKGILQR AVTHVEFYRL RDPASRPPGL 250
    SGWIPSRAVT FVDNHDTGAP QNHWPFPPDR IALGYAYVLT HPGIPCVFGP 300
    HLWGDDPVLS GVIRLLIDLR KRCCVCADAP VKIQMAENDI YVAKVGHRLT 350
    VKLGPRYEMP VELIPKEPEW SLAVAGEDYA VWERVQYDTD ADAKVVAMER 400
    EMMDVGDDGE YYPLERVPVD NSRQSIGSWI EPPPGIVEPS DGEADPR 447
    Length:447
    Mass (Da):50,076
    Last modified:May 26, 2009 - v1
    Checksum:i3C78478D57632686
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP001332 Genomic DNA. Translation: ACO67331.1.
    RefSeqiXP_002506073.1. XM_002506027.1.

    Genome annotation databases

    GeneIDi8248806.
    KEGGimis:MICPUN_96728.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP001332 Genomic DNA. Translation: ACO67331.1 .
    RefSeqi XP_002506073.1. XM_002506027.1.

    3D structure databases

    ProteinModelPortali C1EGI4.
    ModBasei Search...
    MobiDBi Search...

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    GeneIDi 8248806.
    KEGGi mis:MICPUN_96728.

    Phylogenomic databases

    HOGENOMi HOG000239525.
    KOi K01176.

    Family and domain databases

    Gene3Di 2.60.40.1180. 1 hit.
    3.20.20.80. 1 hit.
    InterProi IPR012850. A-amylase_bs_C.
    IPR006046. Alpha_amylase.
    IPR015902. Glyco_hydro_13.
    IPR013780. Glyco_hydro_13_b.
    IPR006047. Glyco_hydro_13_cat_dom.
    IPR013781. Glyco_hydro_catalytic_dom.
    IPR017853. Glycoside_hydrolase_SF.
    [Graphical view ]
    PANTHERi PTHR10357. PTHR10357. 1 hit.
    Pfami PF07821. Alpha-amyl_C2. 1 hit.
    PF00128. Alpha-amylase. 1 hit.
    [Graphical view ]
    PRINTSi PR00110. ALPHAAMYLASE.
    SMARTi SM00810. Alpha-amyl_C2. 1 hit.
    [Graphical view ]
    SUPFAMi SSF51445. SSF51445. 1 hit.
    ProtoNeti Search...

    Publicationsi

    1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: RCC299 / NOUM17Imported.

    Entry informationi

    Entry nameiC1EGI4_MICSR
    AccessioniPrimary (citable) accession number: C1EGI4
    Entry historyi
    Integrated into UniProtKB/TrEMBL: May 26, 2009
    Last sequence update: May 26, 2009
    Last modified: October 1, 2014
    This is version 26 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteomeImported

    External Data

    Dasty 3