Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.
Protein

Probable 2-(5''-triphosphoribosyl)-3'-dephosphocoenzyme-A synthase

Gene

mdcB

Organism
Azotobacter vinelandii (strain DJ / ATCC BAA-1303)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

Involved in the formation of 2-(5''-phosphoribosyl)-3'-dephosphocoenzyme-A, the prosthetic group of the acyl-carrier protein of the malonate decarboxylase.UniRule annotation

Catalytic activityi

ATP + 3'-dephospho-CoA = 2'-(5-triphospho-alpha-D-ribosyl)-3'-dephospho-CoA + adenine.UniRule annotation

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Molecular functioni

Transferase

Keywords - Ligandi

ATP-binding, Nucleotide-binding

Names & Taxonomyi

Protein namesi
Recommended name:
Probable 2-(5''-triphosphoribosyl)-3'-dephosphocoenzyme-A synthaseUniRule annotation (EC:2.4.2.52UniRule annotation)
Short name:
2-(5''-triphosphoribosyl)-3'-dephospho-CoA synthaseUniRule annotation
Gene namesi
Name:mdcBUniRule annotation
Ordered Locus Names:Avin_10290
OrganismiAzotobacter vinelandii (strain DJ / ATCC BAA-1303)
Taxonomic identifieri322710 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaPseudomonadalesPseudomonadaceaeAzotobacter
Proteomesi
  • UP000002424 Componenti: Chromosome

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_10002058721 – 292Probable 2-(5''-triphosphoribosyl)-3'-dephosphocoenzyme-A synthaseAdd BLAST292

Interactioni

Protein-protein interaction databases

STRINGi322710.Avin_10290.

Family & Domainsi

Sequence similaritiesi

Belongs to the CitG/MdcB family.UniRule annotation

Phylogenomic databases

eggNOGiENOG4108K6F. Bacteria.
COG1767. LUCA.
HOGENOMiHOG000258582.
KOiK13930.
OMAiQSWQRPA.
OrthoDBiPOG091H0I1L.

Family and domain databases

HAMAPiMF_01883. MdcB. 1 hit.
InterProiIPR002736. CitG.
IPR017555. TriPribosyl-deP-CoA_syn.
[Graphical view]
PfamiPF01874. CitG. 1 hit.
[Graphical view]
TIGRFAMsiTIGR03132. malonate_mdcB. 1 hit.

Sequencei

Sequence statusi: Complete.

C1DNP5-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MSAFIATIPR PSLAERFADL AVGALIDEAE LSPKPALVDR RGSGAHRDLD
60 70 80 90 100
LKLMHASARA LWPAFHAMAE AARSLAELDR PLRETIGRLG REGEARMLAV
110 120 130 140 150
TGGVNTHRGA IWALGLLVTA AALEPQRLAP EQVSLRAARL ARLEDRQMPA
160 170 180 190 200
QPPSHGERVR QRYGVRGARE EARGGFPGVI RHGLPQLRRS RAAGCDENHA
210 220 230 240 250
RLDALLAIMA QLEDTCVLHR AGLEGLRCMQ DGARAVLVAG GSASLAGRRS
260 270 280 290
LRDLELGLLE LNASPGGAAD LLAVTLFLDR LEPMLGAPIG SL
Length:292
Mass (Da):31,203
Last modified:May 26, 2009 - v1
Checksum:iBBDF34F9FEDAF7DB
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP001157 Genomic DNA. Translation: ACO77261.1.
RefSeqiWP_012699684.1. NC_012560.1.

Genome annotation databases

EnsemblBacteriaiACO77261; ACO77261; Avin_10290.
KEGGiavn:Avin_10290.
PATRICi21028343. VBIAzoVin72790_0963.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP001157 Genomic DNA. Translation: ACO77261.1.
RefSeqiWP_012699684.1. NC_012560.1.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi322710.Avin_10290.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiACO77261; ACO77261; Avin_10290.
KEGGiavn:Avin_10290.
PATRICi21028343. VBIAzoVin72790_0963.

Phylogenomic databases

eggNOGiENOG4108K6F. Bacteria.
COG1767. LUCA.
HOGENOMiHOG000258582.
KOiK13930.
OMAiQSWQRPA.
OrthoDBiPOG091H0I1L.

Family and domain databases

HAMAPiMF_01883. MdcB. 1 hit.
InterProiIPR002736. CitG.
IPR017555. TriPribosyl-deP-CoA_syn.
[Graphical view]
PfamiPF01874. CitG. 1 hit.
[Graphical view]
TIGRFAMsiTIGR03132. malonate_mdcB. 1 hit.
ProtoNetiSearch...

Entry informationi

Entry nameiMDCB_AZOVD
AccessioniPrimary (citable) accession number: C1DNP5
Entry historyi
Integrated into UniProtKB/Swiss-Prot: September 22, 2009
Last sequence update: May 26, 2009
Last modified: November 2, 2016
This is version 44 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. SIMILARITY comments
    Index of protein domains and families

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.