C1DN43 (C1DN43_AZOVD) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Heme ABC exporter, ATP-binding protein CcmA EMBL ACO79210.1

Gene names

Name:	ccmA EMBL ACO79210.1
Ordered Locus Names:	Avin_30450

Organism

Azotobacter vinelandii (strain DJ / ATCC BAA-1303) [Complete proteome] [HAMAP] EMBL ACO79210.1

Taxonomic identifier

322710 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Proteobacteria › Gammaproteobacteria › Pseudomonadales › Pseudomonadaceae › Azotobacter group › Azotobacter › Azotobacter vinelandii

Protein attributes

Sequence length	211 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Function	Part of the ABC transporter complex CcmAB involved in the biogenesis of c-type cytochromes; once thought to export heme, this seems not to be the case, but its exact role is uncertain. Responsible for energy coupling to the transport system By similarity. SAAS SAAS005895
Catalytic activity	ATP + H2O + heme(In) = ADP + phosphate + heme(Out). SAAS SAAS005895
Sequence similarities	Contains 1 ABC transporter domain. SAAS SAAS005895

Ontologies

Keywords
Biological process	Cytochrome c-type biogenesis SAAS SAAS005895 Transport SAAS SAAS005895
Cellular component	Membrane SAAS SAAS005895
Ligand	ATP-binding SAAS SAAS005895 EMBL ACO79210.1 Nucleotide-binding
Molecular function	Hydrolase SAAS SAAS005895
Technical term	Complete proteome
Gene Ontology (GO)
Biological_process	ATP catabolic process Inferred from electronic annotation. Source: GOC cytochrome complex assembly Inferred from electronic annotation. Source: UniProtKB-KW
Cellular_component	membrane Inferred from electronic annotation. Source: UniProtKB-KW outer membrane-bounded periplasmic space Inferred from electronic annotation. Source: InterPro
Molecular_function	ATP binding Inferred from electronic annotation. Source: UniProtKB-KW ATPase activity Inferred from electronic annotation. Source: InterPro transporter activity Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	C1DN43 [UniParc]. Last modified May 26, 2009. Version 1. Checksum: F1F88A1682AEF11F	FASTA	211	23,266
	10 20 30 40 50 60 MTSPFLEAMA LACERDWRVL FERLDLALAP GDMLQVVGPN GSGKTSLLRL LAGLMQPTAG 70 80 90 100 110 120 EVRLRGRGLR GQRAELARNL LWIGHAPGIK GLLSAEENLA WLCALHRPLG REAIWAALAA 130 140 150 160 170 180 VGLRGFEDVP CHSLSAGQQR RVALARLHLE APPLWILDEP FTALDRQGVA QLERHLRAHC 190 200 210 ERGGMVVLTT HHSLEVRPAT YRELDLERHA A

References

[1]

"Genome sequence of Azotobacter vinelandii, an obligate aerobe specialized to support diverse anaerobic metabolic processes." Setubal J.C., Dos Santos P., Goldman B.S., Ertesvaag H., Espin G., Rubio L.M., Valla S., Almeida N.F., Balasubramanian D., Cromes L., Curatti L., Du Z., Godsy E., Goodner B., Hellner-Burris K., Hernandez J.A., Houmiel K., Imperial J. , Kennedy C., Larson T.J., Latreille P., Ligon L.S., Lu J., Maerk M., Miller N.M., Norton S., O'Carroll I.P., Paulsen I., Raulfs E.C., Roemer R., Rosser J., Segura D., Slater S., Stricklin S.L., Studholme D.J., Sun J., Viana C.J., Wallin E., Wang B., Wheeler C., Zhu H., Dean D.R., Dixon R., Wood D. J. Bacteriol. 191:4534-4545(2009) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: DJ / ATCC BAA-1303.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP001157 Genomic DNA. Translation: ACO79210.1.
RefSeq	YP_002800185.1. NC_012560.1.
3D structure databases
ModBase	Search...
Protein-protein interaction databases
STRING	322710.Avin_30450.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	ACO79210; ACO79210; Avin_30450.
GeneID	7761945.
KEGG	avn:Avin_30450.
PATRIC	21032238. VBIAzoVin72790_2876.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	COG4133.
KO	K02193.
OMA	IWDALAR.
ProtClustDB	PRK13538.
Enzyme and pathway databases
BioCyc	AVIN322710:GJ0M-3044-MONOMER.
Family and domain databases
InterPro	IPR003593. AAA+_ATPase. IPR003439. ABC_transporter-like. IPR005895. ABC_transptr_haem_export_CcmA. IPR027417. P-loop_NTPase. [Graphical view]
Pfam	PF00005. ABC_tran. 1 hit. [Graphical view]
SMART	SM00382. AAA. 1 hit. [Graphical view]
SUPFAM	SSF52540. SSF52540. 1 hit.
TIGRFAMs	TIGR01189. ccmA. 1 hit.
PROSITE	PS50893. ABC_TRANSPORTER_2. 1 hit. PS51243. CCMA. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

C1DN43_AZOVD

Accession

Primary (citable) accession number: C1DN43

Entry history

Integrated into UniProtKB/TrEMBL:	May 26, 2009
Last sequence update:	May 26, 2009
Last modified:	May 29, 2013
This is version 31 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)