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Protein
Submitted name:

2-oxoglutarate dehydrogenase, E1 component

Gene

sucA

Organism
Azotobacter vinelandii (strain DJ / ATCC BAA-1303)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Enzyme and pathway databases

BioCyciAVIN322710:GJ0M-2977-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
2-oxoglutarate dehydrogenase, E1 componentImported
Gene namesi
Name:sucAImported
Ordered Locus Names:Avin_29770Imported
OrganismiAzotobacter vinelandii (strain DJ / ATCC BAA-1303)Imported
Taxonomic identifieri322710 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaPseudomonadalesPseudomonadaceaeAzotobacter
ProteomesiUP000002424 Componenti: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi322710.Avin_29770.

Structurei

3D structure databases

ProteinModelPortaliC1DM56.
SMRiC1DM56. Positions 90-943.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Phylogenomic databases

eggNOGiCOG0567.
HOGENOMiHOG000259586.
KOiK00164.
OMAiQNQGAWF.
OrthoDBiEOG6V1M1F.

Family and domain databases

Gene3Di3.40.50.970. 2 hits.
InterProiIPR011603. 2oxoglutarate_DH_E1.
IPR001017. DH_E1.
IPR029061. THDP-binding.
IPR005475. Transketolase-like_Pyr-bd.
[Graphical view]
PANTHERiPTHR23152. PTHR23152. 1 hit.
PfamiPF00676. E1_dh. 1 hit.
PF02779. Transket_pyr. 1 hit.
[Graphical view]
PIRSFiPIRSF000157. Oxoglu_dh_E1. 1 hit.
SMARTiSM00861. Transket_pyr. 1 hit.
[Graphical view]
SUPFAMiSSF52518. SSF52518. 2 hits.
TIGRFAMsiTIGR00239. 2oxo_dh_E1. 1 hit.

Sequencei

Sequence statusi: Complete.

C1DM56-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MQDSVMQRMW NSAHLSGGNA AYVEELYELY LHDPNAVPEE WRTYFEKLPA
60 70 80 90 100
EAGTSTDVPH APVRDQFVLL AKNQRRAQPV ATSSVSTEHE KKQVEVLRLI
110 120 130 140 150
QAYRTRGHQA SQLDPLGLWQ RTAPSDLSIT HYGLTNADLD TPFRTGELYI
160 170 180 190 200
GKEEATLREI LQALQETYCR TIGAEFTHIV DSEQRNWFAQ RLESVRGRPV
210 220 230 240 250
YSKEAKSHLL ERLSAAEGLE KYLGTKYPGT KRFGLEGGES LVPVVDEIIQ
260 270 280 290 300
RSGSYGTKEV VIGMAHRGRL NLLVNALGKN PRDLFDEFEG KHLVELGSGD
310 320 330 340 350
VKYHQGFSSN VMTSGGEVHL AMAFNPSHLE IVSPVVEGSV RARQDRRVDA
360 370 380 390 400
TGEKVVPISI HGDSAFAGQG VVMETFQMSQ IRGYKTGGTI HIVVNNQVGF
410 420 430 440 450
TTSNPVDTRS TEYCTDPAKM IQAPVLHVNG DDPEAVLFVT QLAVDYRMQF
460 470 480 490 500
KRDVVIDLVC YRRRGHNEAD EPSGTQPLMY QKIAKQPTTR ELYADALVKE
510 520 530 540 550
GSLSQEEVQA KVDEYRTALD NGQHVLKSLV KEPNTELFVD WTPYLGHAWT
560 570 580 590 600
ARHDTSFELK TLQELNAKLL QIPEGFVVQR QVAKILEDRG RMGVGAMPIN
610 620 630 640 650
WGCAETLAYA TLLKEGHPVR ITGQDVGRGT FSHRHAALHN QKDASRYIPL
660 670 680 690 700
QNLYEGQPKF ELYDSFLSEE AVLAFEYGYA TTTPNALVIW EAQFGDFANG
710 720 730 740 750
AQVVIDQFIS SGETKWGRLC GLTMLLPHGY EGQGPEHSSA RLERYLQLCA
760 770 780 790 800
EQNIQVCVPT TPAQVYHMLR RQVIRPLRKP LVALTPKSLL RHKSAISTLE
810 820 830 840 850
DLALGSFHPV LPEVDSLDPK KVERLVLCSG KVYYDLLDKR HAEGREDIAI
860 870 880 890 900
VRIEQLYPFP EEELAEVMAP YTNLKHVVWC QEEPMNQGAW YCSQHHMRRV
910 920 930 940
ASAHKKELFL QYAGREASAA PACGYASMHA EQQEKLLQDA FTV
Length:943
Mass (Da):105,874
Last modified:May 26, 2009 - v1
Checksum:iE7E07FEB527E01F8
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP001157 Genomic DNA. Translation: ACO79143.1.
RefSeqiWP_012701530.1. NC_012560.1.
YP_002800118.1. NC_012560.1.

Genome annotation databases

EnsemblBacteriaiACO79143; ACO79143; Avin_29770.
KEGGiavn:Avin_29770.
PATRICi21032108. VBIAzoVin72790_2811.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP001157 Genomic DNA. Translation: ACO79143.1.
RefSeqiWP_012701530.1. NC_012560.1.
YP_002800118.1. NC_012560.1.

3D structure databases

ProteinModelPortaliC1DM56.
SMRiC1DM56. Positions 90-943.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi322710.Avin_29770.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiACO79143; ACO79143; Avin_29770.
KEGGiavn:Avin_29770.
PATRICi21032108. VBIAzoVin72790_2811.

Phylogenomic databases

eggNOGiCOG0567.
HOGENOMiHOG000259586.
KOiK00164.
OMAiQNQGAWF.
OrthoDBiEOG6V1M1F.

Enzyme and pathway databases

BioCyciAVIN322710:GJ0M-2977-MONOMER.

Family and domain databases

Gene3Di3.40.50.970. 2 hits.
InterProiIPR011603. 2oxoglutarate_DH_E1.
IPR001017. DH_E1.
IPR029061. THDP-binding.
IPR005475. Transketolase-like_Pyr-bd.
[Graphical view]
PANTHERiPTHR23152. PTHR23152. 1 hit.
PfamiPF00676. E1_dh. 1 hit.
PF02779. Transket_pyr. 1 hit.
[Graphical view]
PIRSFiPIRSF000157. Oxoglu_dh_E1. 1 hit.
SMARTiSM00861. Transket_pyr. 1 hit.
[Graphical view]
SUPFAMiSSF52518. SSF52518. 2 hits.
TIGRFAMsiTIGR00239. 2oxo_dh_E1. 1 hit.
ProtoNetiSearch...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: DJ / ATCC BAA-1303Imported.

Entry informationi

Entry nameiC1DM56_AZOVD
AccessioniPrimary (citable) accession number: C1DM56
Entry historyi
Integrated into UniProtKB/TrEMBL: May 26, 2009
Last sequence update: May 26, 2009
Last modified: May 27, 2015
This is version 37 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.