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C1DM56

- C1DM56_AZOVD

UniProt

C1DM56 - C1DM56_AZOVD

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Protein
Submitted name:

2-oxoglutarate dehydrogenase, E1 component

Gene

sucA

Organism
Azotobacter vinelandii (strain DJ / ATCC BAA-1303)
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi

Functioni

GO - Molecular functioni

  1. oxoglutarate dehydrogenase (succinyl-transferring) activity Source: InterPro
  2. thiamine pyrophosphate binding Source: InterPro

GO - Biological processi

  1. tricarboxylic acid cycle Source: InterPro
Complete GO annotation...

Enzyme and pathway databases

BioCyciAVIN322710:GJ0M-2977-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
2-oxoglutarate dehydrogenase, E1 componentImported
Gene namesi
Name:sucAImported
Ordered Locus Names:Avin_29770Imported
OrganismiAzotobacter vinelandii (strain DJ / ATCC BAA-1303)Imported
Taxonomic identifieri322710 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaPseudomonadalesPseudomonadaceaeAzotobacter
ProteomesiUP000002424: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi322710.Avin_29770.

Structurei

3D structure databases

ProteinModelPortaliC1DM56.
SMRiC1DM56. Positions 90-943.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Phylogenomic databases

eggNOGiCOG0567.
HOGENOMiHOG000259586.
KOiK00164.
OMAiGHQNANL.
OrthoDBiEOG6V1M1F.

Family and domain databases

Gene3Di3.40.50.970. 2 hits.
InterProiIPR011603. 2oxoglutarate_DH_E1.
IPR001017. DH_E1.
IPR029061. THDP-binding.
IPR005475. Transketolase-like_Pyr-bd.
[Graphical view]
PANTHERiPTHR23152. PTHR23152. 1 hit.
PfamiPF00676. E1_dh. 1 hit.
PF02779. Transket_pyr. 1 hit.
[Graphical view]
PIRSFiPIRSF000157. Oxoglu_dh_E1. 1 hit.
SMARTiSM00861. Transket_pyr. 1 hit.
[Graphical view]
SUPFAMiSSF52518. SSF52518. 2 hits.
TIGRFAMsiTIGR00239. 2oxo_dh_E1. 1 hit.

Sequencei

Sequence statusi: Complete.

C1DM56-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MQDSVMQRMW NSAHLSGGNA AYVEELYELY LHDPNAVPEE WRTYFEKLPA
60 70 80 90 100
EAGTSTDVPH APVRDQFVLL AKNQRRAQPV ATSSVSTEHE KKQVEVLRLI
110 120 130 140 150
QAYRTRGHQA SQLDPLGLWQ RTAPSDLSIT HYGLTNADLD TPFRTGELYI
160 170 180 190 200
GKEEATLREI LQALQETYCR TIGAEFTHIV DSEQRNWFAQ RLESVRGRPV
210 220 230 240 250
YSKEAKSHLL ERLSAAEGLE KYLGTKYPGT KRFGLEGGES LVPVVDEIIQ
260 270 280 290 300
RSGSYGTKEV VIGMAHRGRL NLLVNALGKN PRDLFDEFEG KHLVELGSGD
310 320 330 340 350
VKYHQGFSSN VMTSGGEVHL AMAFNPSHLE IVSPVVEGSV RARQDRRVDA
360 370 380 390 400
TGEKVVPISI HGDSAFAGQG VVMETFQMSQ IRGYKTGGTI HIVVNNQVGF
410 420 430 440 450
TTSNPVDTRS TEYCTDPAKM IQAPVLHVNG DDPEAVLFVT QLAVDYRMQF
460 470 480 490 500
KRDVVIDLVC YRRRGHNEAD EPSGTQPLMY QKIAKQPTTR ELYADALVKE
510 520 530 540 550
GSLSQEEVQA KVDEYRTALD NGQHVLKSLV KEPNTELFVD WTPYLGHAWT
560 570 580 590 600
ARHDTSFELK TLQELNAKLL QIPEGFVVQR QVAKILEDRG RMGVGAMPIN
610 620 630 640 650
WGCAETLAYA TLLKEGHPVR ITGQDVGRGT FSHRHAALHN QKDASRYIPL
660 670 680 690 700
QNLYEGQPKF ELYDSFLSEE AVLAFEYGYA TTTPNALVIW EAQFGDFANG
710 720 730 740 750
AQVVIDQFIS SGETKWGRLC GLTMLLPHGY EGQGPEHSSA RLERYLQLCA
760 770 780 790 800
EQNIQVCVPT TPAQVYHMLR RQVIRPLRKP LVALTPKSLL RHKSAISTLE
810 820 830 840 850
DLALGSFHPV LPEVDSLDPK KVERLVLCSG KVYYDLLDKR HAEGREDIAI
860 870 880 890 900
VRIEQLYPFP EEELAEVMAP YTNLKHVVWC QEEPMNQGAW YCSQHHMRRV
910 920 930 940
ASAHKKELFL QYAGREASAA PACGYASMHA EQQEKLLQDA FTV
Length:943
Mass (Da):105,874
Last modified:May 26, 2009 - v1
Checksum:iE7E07FEB527E01F8
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP001157 Genomic DNA. Translation: ACO79143.1.
RefSeqiYP_002800118.1. NC_012560.1.

Genome annotation databases

EnsemblBacteriaiACO79143; ACO79143; Avin_29770.
GeneIDi7761878.
KEGGiavn:Avin_29770.
PATRICi21032108. VBIAzoVin72790_2811.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP001157 Genomic DNA. Translation: ACO79143.1 .
RefSeqi YP_002800118.1. NC_012560.1.

3D structure databases

ProteinModelPortali C1DM56.
SMRi C1DM56. Positions 90-943.
ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

STRINGi 322710.Avin_29770.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai ACO79143 ; ACO79143 ; Avin_29770 .
GeneIDi 7761878.
KEGGi avn:Avin_29770.
PATRICi 21032108. VBIAzoVin72790_2811.

Phylogenomic databases

eggNOGi COG0567.
HOGENOMi HOG000259586.
KOi K00164.
OMAi GHQNANL.
OrthoDBi EOG6V1M1F.

Enzyme and pathway databases

BioCyci AVIN322710:GJ0M-2977-MONOMER.

Family and domain databases

Gene3Di 3.40.50.970. 2 hits.
InterProi IPR011603. 2oxoglutarate_DH_E1.
IPR001017. DH_E1.
IPR029061. THDP-binding.
IPR005475. Transketolase-like_Pyr-bd.
[Graphical view ]
PANTHERi PTHR23152. PTHR23152. 1 hit.
Pfami PF00676. E1_dh. 1 hit.
PF02779. Transket_pyr. 1 hit.
[Graphical view ]
PIRSFi PIRSF000157. Oxoglu_dh_E1. 1 hit.
SMARTi SM00861. Transket_pyr. 1 hit.
[Graphical view ]
SUPFAMi SSF52518. SSF52518. 2 hits.
TIGRFAMsi TIGR00239. 2oxo_dh_E1. 1 hit.
ProtoNeti Search...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: DJ / ATCC BAA-1303Imported.

Entry informationi

Entry nameiC1DM56_AZOVD
AccessioniPrimary (citable) accession number: C1DM56
Entry historyi
Integrated into UniProtKB/TrEMBL: May 26, 2009
Last sequence update: May 26, 2009
Last modified: October 1, 2014
This is version 34 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3