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C1DM33 (C1DM33_AZOVD) Unreviewed, UniProtKB/TrEMBL

Last modified April 16, 2014. Version 33. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
Gene names
Name:arsC EMBL ACO79120.1
Ordered Locus Names:Avin_29530 EMBL ACO79120.1
OrganismAzotobacter vinelandii (strain DJ / ATCC BAA-1303) [Complete proteome] [HAMAP] EMBL ACO79120.1
Taxonomic identifier322710 [NCBI]
Taxonomic lineageBacteriaProteobacteriaGammaproteobacteriaPseudomonadalesPseudomonadaceaeAzotobacter

Protein attributes

Sequence length409 AA.
Sequence statusComplete.
Protein existenceEvidence at protein level

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Sites

Metal binding1781Sodium; via carbonyl oxygen PDB 3VS8 PDB 3VS9
Metal binding1871Sodium PDB 3VS8 PDB 3VS9
Metal binding2721Sodium PDB 3VS8 PDB 3VS9

Sequences

Sequence LengthMass (Da)Tools
C1DM33 [UniParc].

Last modified May 26, 2009. Version 1.
Checksum: 731FF59AB4EF37C1

FASTA40944,941
        10         20         30         40         50         60 
MNDMAHPNSA VLADFIPVQL AKPVPQRITL ELTAYGFARA HCLSNGITDE EGFVQVYKTV 

        70         80         90        100        110        120 
KEKFDKYAVS PAQIKQRQLV YFPKLTDIRF GDGNFDIADP EPDQAHLRLF DIKKDPRGAD 

       130        140        150        160        170        180 
LKTRHESYAK VVGKGLEQMF EGTLEAPDDL IHVTCSGYLA PSPAERMVAD RGWFETTVTH 

       190        200        210        220        230        240 
SYNMGCYGAF PAIKMAHGML ASAQWGATPP KTRVDIAHTE LMSAHNNIAE SRVDNIISAT 

       250        260        270        280        290        300 
LFSDGLIKYS VYPEDELRRQ GLRGLRILAM SEHLLPDSAD TMTGVPGSHQ FVMTLSPLVP 

       310        320        330        340        350        360 
AIIKRHVRAF AVDLLRRAGM DFERDKDALS FAIHPGGPKI VDHVQEELGL AEDQVAISKS 

       370        380        390        400 
VFLENGNMSS STIPHILKAY LEEATVGTRI ACLGFGPGLT AAGLVLEKI 

« Hide

References

« Hide 'large scale' references
[1]"Genome sequence of Azotobacter vinelandii, an obligate aerobe specialized to support diverse anaerobic metabolic processes."
Setubal J.C., dos Santos P., Goldman B.S., Ertesvag H., Espin G., Rubio L.M., Valla S., Almeida N.F., Balasubramanian D., Cromes L., Curatti L., Du Z., Godsy E., Goodner B., Hellner-Burris K., Hernandez J.A., Houmiel K., Imperial J. expand/collapse author list , Kennedy C., Larson T.J., Latreille P., Ligon L.S., Lu J., Maerk M., Miller N.M., Norton S., O'Carroll I.P., Paulsen I., Raulfs E.C., Roemer R., Rosser J., Segura D., Slater S., Stricklin S.L., Studholme D.J., Sun J., Viana C.J., Wallin E., Wang B., Wheeler C., Zhu H., Dean D.R., Dixon R., Wood D.
J. Bacteriol. 191:4534-4545(2009) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: DJ / ATCC BAA-1303.
[2]"Structural basis for cyclization specificity of two Azotobacter type III polyketide synthases: a single amino acid substitution reverses their cyclization specificity."
Satou R., Miyanaga A., Ozawa H., Funa N., Katsuyama Y., Miyazono K., Tanokura M., Ohnishi Y., Horinouchi S.
J. Biol. Chem. 288:34146-34157(2013) [PubMed] [Europe PMC] [Abstract]
Cited for: X-RAY CRYSTALLOGRAPHY (1.76 ANGSTROMS) IN COMPLEX WITH SODIUM.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP001157 Genomic DNA. Translation: ACO79120.1.
RefSeqYP_002800095.1. NC_012560.1.

3D structure databases

PDBe
RCSB PDB
PDBj
EntryMethodResolution (Å)ChainPositionsPDBsum
3VS8X-ray1.76A/B/C/D/E/F/G/H1-409[»]
3VS9X-ray1.99A/B/C/D/E/F/G/H1-409[»]
ProteinModelPortalC1DM33.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING322710.Avin_29530.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaACO79120; ACO79120; Avin_29530.
GeneID7761855.
KEGGavn:Avin_29530.
PATRIC21032060. VBIAzoVin72790_2787.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG3424.
HOGENOMHOG000057778.
OMATRHESYA.
OrthoDBEOG60919M.
ProtClustDBCLSK764628.

Enzyme and pathway databases

BioCycAVIN322710:GJ0M-2954-MONOMER.

Family and domain databases

Gene3D3.40.47.10. 2 hits.
InterProIPR012328. Chalcone/stilbene_synth_C.
IPR016039. Thiolase-like.
IPR016038. Thiolase-like_subgr.
[Graphical view]
PfamPF02797. Chal_sti_synt_C. 1 hit.
[Graphical view]
SUPFAMSSF53901. SSF53901. 2 hits.
ProtoNetSearch...

Entry information

Entry nameC1DM33_AZOVD
AccessionPrimary (citable) accession number: C1DM33
Entry history
Integrated into UniProtKB/TrEMBL: May 26, 2009
Last sequence update: May 26, 2009
Last modified: April 16, 2014
This is version 33 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)