C1DC39 (RS21_LARHH) Reviewed, UniProtKB/Swiss-Prot

Names and origin

Protein names

Recommended name:
30S ribosomal protein S21

Gene names

Name:	rpsU
Ordered Locus Names:	LHK_00461

Organism

Laribacter hongkongensis (strain HLHK9) [Complete proteome] [HAMAP]

Taxonomic identifier

557598 [NCBI]

Taxonomic lineage

Bacteria › Proteobacteria › Betaproteobacteria › Neisseriales › Neisseriaceae › Laribacter

Protein attributes

Sequence length	70 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Sequence similarities

Belongs to the ribosomal protein S21P family.

Ontologies

Keywords
Molecular function	Ribonucleoprotein Ribosomal protein
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	translation Inferred from electronic annotation. Source: InterPro
Cellular component	ribosome Inferred from electronic annotation. Source: UniProtKB-KW
Molecular function	structural constituent of ribosome Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Molecule processing
	Chain	1 – 70	70	30S ribosomal protein S21 HAMAP MF_00358		PRO_1000194296

Sequences

	Sequence		Length	Mass (Da)
	C1DC39 [UniParc]. Last modified May 26, 2009. Version 1. Checksum: 6408A2B6D6B82673	FASTA	70	8,507
	10 20 30 40 50 60 MPSVRVKENE PFEVAMRRFK RSIEKTGLLT ELRAREFYEK PTTERKRKKA AAVKRHYKRL 70 RSQMLPPKLY

References

[1]

"The complete genome and proteome of Laribacter hongkongensis reveal potential mechanisms for adaptations to different temperatures and habitats." Woo P.C.Y., Lau S.K.P., Tse H., Teng J.L.L., Curreem S.O., Tsang A.K.L., Fan R.Y.Y., Wong G.K.M., Huang Y., Loman N.J., Snyder L.A.S., Cai J.J., Huang J.-D., Mak W., Pallen M.J., Lok S., Yuen K.-Y. PLoS Genet. 5:E1000416-E1000416(2009) [PubMed: 19283063] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: HLHK9.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP001154 Genomic DNA. Translation: ACO73456.1.
RefSeq	YP_002794465.1. NC_012559.1.
3D structure databases
ModBase	Search...
Protein-protein interaction databases
STRING	C1DC39.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	7756086.
GenomeReviews	Gene locus LHK_00461 in contig CP001154_GR.
KEGG	lhk:LHK_00461.
PATRIC	22298033. VBILarHon49832_0441.
Organism-specific databases
CMR	Search...
Phylogenomic databases
OMA	FFEKPTW.
ProtClustDB	PRK00270.
Family and domain databases
HAMAP	MF_00358. Ribosomal_S21. [Tree]
InterPro	IPR001911. Ribosomal_S21. [Graphical view]
KO	K02970.
Pfam	PF01165. Ribosomal_S21. 1 hit. [Graphical view]
PRINTS	PR00976. RIBOSOMALS21.
ProDom	PD005521. Ribosomal_S21. 1 hit. [Graphical view] [Entries sharing at least one domain]
TIGRFAMs	TIGR00030. S21p. 1 hit.
PROSITE	PS01181. RIBOSOMAL_S21. False negative. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

RS21_LARHH

Accession

Primary (citable) accession number: C1DC39

Entry history

Integrated into UniProtKB/Swiss-Prot:	July 28, 2009
Last sequence update:	May 26, 2009
Last modified:	January 25, 2012
This is version 18 of the entry and version 1 of the sequence. [Complete history]

Entry status

Reviewed (UniProtKB/Swiss-Prot)

Annotation program

Prokaryotic Protein Annotation Program