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C1DBN5 (C1DBN5_LARHH) Unreviewed, UniProtKB/TrEMBL

Last modified April 16, 2014. Version 29. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
Gene names
Name:flgK EMBL ACO73432.1
Ordered Locus Names:LHK_00437 EMBL ACO73432.1
OrganismLaribacter hongkongensis (strain HLHK9) [Complete proteome] [HAMAP] EMBL ACO73432.1
Taxonomic identifier557598 [NCBI]
Taxonomic lineageBacteriaProteobacteriaBetaproteobacteriaNeisserialesNeisseriaceaeLaribacter

Protein attributes

Sequence length610 AA.
Sequence statusComplete.
Protein existencePredicted

Sequences

Sequence LengthMass (Da)Tools
C1DBN5 [UniParc].

Last modified May 26, 2009. Version 1.
Checksum: 8202C2E19CEC3886

FASTA61064,328
        10         20         30         40         50         60 
MSLLNIGVTG LNAARAALTT TSQNVSNVNT AGYHRKAVNQ SALYYGPGQF GNTGNGVRVD 

        70         80         90        100        110        120 
DIYRVYDSYL DKAVQTATSS SKYYDTQYAY LDQLDQIISS STTGLAPRMQ DLFTSIQSLS 

       130        140        150        160        170        180 
SDPSSIPARQ AMIDKAAALV NTFKSVDIRH EDLRTGINTE IRSGVTSING LAKQIATLND 

       190        200        210        220        230        240 
QIAKLWQGGS NPPNDLLDQR DQALTELNKY IGATSVPLDD GTINVFMGNG QSLVLGAQTF 

       250        260        270        280        290        300 
ELEAIQSKAD ASELTVGYKG TGIELPKTLL TGGSLGGALE MRDTLNKSQQ QLGAIAVSLV 

       310        320        330        340        350        360 
SSFNAQHQQG VDRNGNPGKE FFGLDFNFPE FNTAFNVASG QNPGAPVTHP VNLQNLTPEQ 

       370        380        390        400        410        420 
TEVVNRFALR ALSQKVTKPE EIAAASGYIY QAGATNTGDG KVSSYSGLAG MRADLATALG 

       430        440        450        460        470        480 
TAPGITVTSD GAGNFTLAGA GLTTPPYSII PAPGTTGGYK VVHTSPTGQQ TDAGFEFTMT 

       490        500        510        520        530        540 
GTPAAGDQFQ FRQRLPTDPF TETGDNSNLT QLAKLQTAEV VDVGGGKTTL QGAYGQLATM 

       550        560        570        580        590        600 
VGSKTNEVKV MKDAQTAILK EAMVSRENVS GVNLDEEAAN LLKYQQAYQA SSKVVQIAGS 

       610 
LFDSILQAIG 

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References

[1]"The complete genome and proteome of Laribacter hongkongensis reveal potential mechanisms for adaptations to different temperatures and habitats."
Woo P.C., Lau S.K., Tse H., Teng J.L., Curreem S.O., Tsang A.K., Fan R.Y., Wong G.K., Huang Y., Loman N.J., Snyder L.A., Cai J.J., Huang J.D., Mak W., Pallen M.J., Lok S., Yuen K.Y.
PLoS Genet. 5:E1000416-E1000416(2009) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: HLHK9 EMBL ACO73432.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP001154 Genomic DNA. Translation: ACO73432.1.
RefSeqYP_002794441.1. NC_012559.1.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING557598.LHK_00437.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaACO73432; ACO73432; LHK_00437.
GeneID7756062.
KEGGlhk:LHK_00437.
PATRIC22297985. VBILarHon49832_0417.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG1256.
HOGENOMHOG000265598.
KOK02396.
OMAANIETEG.
OrthoDBEOG6NWBMH.

Enzyme and pathway databases

BioCycLHON557598:GHO5-445-MONOMER.

Family and domain databases

InterProIPR001444. Flag_bb_rod_N.
IPR002371. Flagellar_hook-assoc_FlgK.
IPR010930. Flg_bb/hook_C_dom.
[Graphical view]
PfamPF00460. Flg_bb_rod. 1 hit.
PF06429. Flg_bbr_C. 1 hit.
[Graphical view]
PRINTSPR01005. FLGHOOKAP1.
TIGRFAMsTIGR02492. flgK_ends. 1 hit.
ProtoNetSearch...

Entry information

Entry nameC1DBN5_LARHH
AccessionPrimary (citable) accession number: C1DBN5
Entry history
Integrated into UniProtKB/TrEMBL: May 26, 2009
Last sequence update: May 26, 2009
Last modified: April 16, 2014
This is version 29 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)