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C1DB59

- C1DB59_LARHH

UniProt

C1DB59 - C1DB59_LARHH

Protein
Submitted name:

Kgd

Gene

kgd

Organism
Laribacter hongkongensis (strain HLHK9)
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi
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    • History
      Entry version 34 (01 Oct 2014)
      Sequence version 1 (26 May 2009)
      Previous versions | rss
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    Functioni

    GO - Molecular functioni

    1. oxoglutarate dehydrogenase (succinyl-transferring) activity Source: UniProtKB-EC
    2. thiamine pyrophosphate binding Source: InterPro

    GO - Biological processi

    1. tricarboxylic acid cycle Source: InterPro

    Keywords - Molecular functioni

    OxidoreductaseImported

    Enzyme and pathway databases

    BioCyciLHON557598:GHO5-2451-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    KgdImported (EC:1.2.4.2Imported)
    Gene namesi
    Name:kgdImported
    Ordered Locus Names:LHK_02416Imported
    OrganismiLaribacter hongkongensis (strain HLHK9)Imported
    Taxonomic identifieri557598 [NCBI]
    Taxonomic lineageiBacteriaProteobacteriaBetaproteobacteriaNeisserialesChromobacteriaceaeLaribacter
    ProteomesiUP000002010: Chromosome

    Interactioni

    Protein-protein interaction databases

    STRINGi557598.LHK_02416.

    Structurei

    3D structure databases

    ProteinModelPortaliC1DB59.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Phylogenomic databases

    eggNOGiCOG0567.
    HOGENOMiHOG000259587.
    KOiK00164.
    OMAiGHQNANL.
    OrthoDBiEOG6V1M1F.

    Family and domain databases

    Gene3Di3.40.50.970. 2 hits.
    InterProiIPR011603. 2oxoglutarate_DH_E1.
    IPR001017. DH_E1.
    IPR029061. THDP-binding.
    IPR005475. Transketolase-like_Pyr-bd.
    [Graphical view]
    PANTHERiPTHR23152. PTHR23152. 1 hit.
    PfamiPF00676. E1_dh. 1 hit.
    PF02779. Transket_pyr. 1 hit.
    [Graphical view]
    PIRSFiPIRSF000157. Oxoglu_dh_E1. 1 hit.
    SMARTiSM00861. Transket_pyr. 1 hit.
    [Graphical view]
    SUPFAMiSSF52518. SSF52518. 2 hits.
    TIGRFAMsiTIGR00239. 2oxo_dh_E1. 1 hit.

    Sequencei

    Sequence statusi: Complete.

    C1DB59-1 [UniParc]FASTAAdd to Basket

    « Hide

    MMQAAISHSY LFGGNAPFIE ELYEQYLDDP ATVSAEWREY FDKLQQTGGA    50
    TRDVPHQPIQ ESFIQLAKTP RVFVNKPSEA TWEAMQKQVA VLKLISAYRV 100
    LGSRWATLDP LKRMDTQPVP ELDPAYHGLT DTDMAQVFNT GSFVGLASGS 150
    LSEILGTLKQ TYCGNIGLEY MHIIDSKQKR WVQNYFEGSR STPRYDAAKK 200
    RSILKQVTAA ETLERYLHTK YVGQKRFSLE GGESMIAALD HLIQNATGFG 250
    VKELIVGMAH RGRLNVLVNT LGKLPRDLFS EFEGRPAVEL PSGDVKYHMG 300
    YSSDIPTQNG PMHVSLAFNP SHLEIVNPVV EGSVRARQQR RRDTERREVV 350
    PVLIHGDAAF GGLGVNQGTF NLSGTRGYGT GGTLHFVVNN QIGFTTSDTR 400
    DMRSSMYATD IAKMVDAPIF HVNGDDPEAV CFVMQAALEF RMQFKKDVVV 450
    DMVCFRKLGH NEGDDPMLTQ PMMYKKIVQH PGVRARYVER LVQEGSIDAS 500
    EADSLISAYR AALDKGEHVE QTVLSNYTRE FKLDWTPYIG THWAHPTDTT 550
    LPTADLQRLA DKLTTVPEGF KLHPTVSKLL AARREMAAGN QAVDWGMAET 600
    LAYASLVESG YGVRLSGEDS GRGTFSHRHS VLHDQNRERW DAGAYVPLRN 650
    LSDNQAEFLV IDSILNEEAV LAYEYGYACS SPKELTIWEA QFGDFANGAQ 700
    VAIDQFIVSG ETKWGRLCGL TMILPHGYDG QGPEHSSARV ERYLQLCAEH 750
    NVQVVMPSTA AQMFHVLRRQ MLRPYRKPLI IPMSKRLLRY KESMSPLADF 800
    TSGGFKPVIG EIEALDAKKV KRVVLCAGQV YYDLLNARRE RDIQDIAIVR 850
    VEQLYPFPTE QLAAELAQYT NARELMWVQE EPKNQGAWYQ IRHRLERQLA 900
    PKQTLLFAGR PSSASPAVGY MSKHVAQLKA FLEEAMTLG 939
    Length:939
    Mass (Da):105,248
    Last modified:May 26, 2009 - v1
    Checksum:i9E450A1D333BE37B
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP001154 Genomic DNA. Translation: ACO75398.1.
    RefSeqiYP_002796407.1. NC_012559.1.

    Genome annotation databases

    EnsemblBacteriaiACO75398; ACO75398; LHK_02416.
    GeneIDi7758027.
    KEGGilhk:LHK_02416.
    PATRICi22301659. VBILarHon49832_2211.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP001154 Genomic DNA. Translation: ACO75398.1 .
    RefSeqi YP_002796407.1. NC_012559.1.

    3D structure databases

    ProteinModelPortali C1DB59.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 557598.LHK_02416.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai ACO75398 ; ACO75398 ; LHK_02416 .
    GeneIDi 7758027.
    KEGGi lhk:LHK_02416.
    PATRICi 22301659. VBILarHon49832_2211.

    Phylogenomic databases

    eggNOGi COG0567.
    HOGENOMi HOG000259587.
    KOi K00164.
    OMAi GHQNANL.
    OrthoDBi EOG6V1M1F.

    Enzyme and pathway databases

    BioCyci LHON557598:GHO5-2451-MONOMER.

    Family and domain databases

    Gene3Di 3.40.50.970. 2 hits.
    InterProi IPR011603. 2oxoglutarate_DH_E1.
    IPR001017. DH_E1.
    IPR029061. THDP-binding.
    IPR005475. Transketolase-like_Pyr-bd.
    [Graphical view ]
    PANTHERi PTHR23152. PTHR23152. 1 hit.
    Pfami PF00676. E1_dh. 1 hit.
    PF02779. Transket_pyr. 1 hit.
    [Graphical view ]
    PIRSFi PIRSF000157. Oxoglu_dh_E1. 1 hit.
    SMARTi SM00861. Transket_pyr. 1 hit.
    [Graphical view ]
    SUPFAMi SSF52518. SSF52518. 2 hits.
    TIGRFAMsi TIGR00239. 2oxo_dh_E1. 1 hit.
    ProtoNeti Search...

    Publicationsi

    1. "The complete genome and proteome of Laribacter hongkongensis reveal potential mechanisms for adaptations to different temperatures and habitats."
      Woo P.C.Y., Lau S.K.P., Tse H., Teng J.L.L., Curreem S.O., Tsang A.K.L., Fan R.Y.Y., Wong G.K.M., Huang Y., Loman N.J., Snyder L.A.S., Cai J.J., Huang J.-D., Mak W., Pallen M.J., Lok S., Yuen K.-Y.
      PLoS Genet. 5:E1000416-E1000416(2009) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: HLHK9Imported.

    Entry informationi

    Entry nameiC1DB59_LARHH
    AccessioniPrimary (citable) accession number: C1DB59
    Entry historyi
    Integrated into UniProtKB/TrEMBL: May 26, 2009
    Last sequence update: May 26, 2009
    Last modified: October 1, 2014
    This is version 34 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteomeImported

    External Data

    Dasty 3