C1DB59 (C1DB59_LARHH) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Kgd EMBL ACO75398.1
EC=1.2.4.2 EMBL ACO75398.1

Gene names

Name:	kgd EMBL ACO75398.1
Ordered Locus Names:	LHK_02416

Organism

Laribacter hongkongensis (strain HLHK9) [Complete proteome] [HAMAP] EMBL ACO75398.1

Taxonomic identifier

557598 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Proteobacteria › Betaproteobacteria › Neisseriales › Neisseriaceae › Laribacter › Laribacter hongkongensis

Protein attributes

Sequence length	939 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Molecular function	Oxidoreductase EMBL ACO75398.1
Technical term	Complete proteome
Gene Ontology (GO)
Biological_process	tricarboxylic acid cycle Inferred from electronic annotation. Source: InterPro
Molecular_function	oxoglutarate dehydrogenase (succinyl-transferring) activity Inferred from electronic annotation. Source: EC thiamine pyrophosphate binding Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	C1DB59 [UniParc]. Last modified May 26, 2009. Version 1. Checksum: 9E450A1D333BE37B	FASTA	939	105,248
	10 20 30 40 50 60 MMQAAISHSY LFGGNAPFIE ELYEQYLDDP ATVSAEWREY FDKLQQTGGA TRDVPHQPIQ 70 80 90 100 110 120 ESFIQLAKTP RVFVNKPSEA TWEAMQKQVA VLKLISAYRV LGSRWATLDP LKRMDTQPVP 130 140 150 160 170 180 ELDPAYHGLT DTDMAQVFNT GSFVGLASGS LSEILGTLKQ TYCGNIGLEY MHIIDSKQKR 190 200 210 220 230 240 WVQNYFEGSR STPRYDAAKK RSILKQVTAA ETLERYLHTK YVGQKRFSLE GGESMIAALD 250 260 270 280 290 300 HLIQNATGFG VKELIVGMAH RGRLNVLVNT LGKLPRDLFS EFEGRPAVEL PSGDVKYHMG 310 320 330 340 350 360 YSSDIPTQNG PMHVSLAFNP SHLEIVNPVV EGSVRARQQR RRDTERREVV PVLIHGDAAF 370 380 390 400 410 420 GGLGVNQGTF NLSGTRGYGT GGTLHFVVNN QIGFTTSDTR DMRSSMYATD IAKMVDAPIF 430 440 450 460 470 480 HVNGDDPEAV CFVMQAALEF RMQFKKDVVV DMVCFRKLGH NEGDDPMLTQ PMMYKKIVQH 490 500 510 520 530 540 PGVRARYVER LVQEGSIDAS EADSLISAYR AALDKGEHVE QTVLSNYTRE FKLDWTPYIG 550 560 570 580 590 600 THWAHPTDTT LPTADLQRLA DKLTTVPEGF KLHPTVSKLL AARREMAAGN QAVDWGMAET 610 620 630 640 650 660 LAYASLVESG YGVRLSGEDS GRGTFSHRHS VLHDQNRERW DAGAYVPLRN LSDNQAEFLV 670 680 690 700 710 720 IDSILNEEAV LAYEYGYACS SPKELTIWEA QFGDFANGAQ VAIDQFIVSG ETKWGRLCGL 730 740 750 760 770 780 TMILPHGYDG QGPEHSSARV ERYLQLCAEH NVQVVMPSTA AQMFHVLRRQ MLRPYRKPLI 790 800 810 820 830 840 IPMSKRLLRY KESMSPLADF TSGGFKPVIG EIEALDAKKV KRVVLCAGQV YYDLLNARRE 850 860 870 880 890 900 RDIQDIAIVR VEQLYPFPTE QLAAELAQYT NARELMWVQE EPKNQGAWYQ IRHRLERQLA 910 920 930 PKQTLLFAGR PSSASPAVGY MSKHVAQLKA FLEEAMTLG

References

[1]

"The complete genome and proteome of Laribacter hongkongensis reveal potential mechanisms for adaptations to different temperatures and habitats." Woo P.C.Y., Lau S.K.P., Tse H., Teng J.L.L., Curreem S.O., Tsang A.K.L., Fan R.Y.Y., Wong G.K.M., Huang Y., Loman N.J., Snyder L.A.S., Cai J.J., Huang J.-D., Mak W., Pallen M.J., Lok S., Yuen K.-Y. PLoS Genet. 5:E1000416-E1000416(2009) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: HLHK9.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP001154 Genomic DNA. Translation: ACO75398.1.
RefSeq	YP_002796407.1. NC_012559.1.
3D structure databases
ModBase	Search...
Protein-protein interaction databases
STRING	557598.LHK_02416.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	ACO75398; ACO75398; LHK_02416.
GeneID	7758027.
KEGG	lhk:LHK_02416.
PATRIC	22301659. VBILarHon49832_2211.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	COG0567.
HOGENOM	HOG000259587.
KO	K00164.
OMA	IIKRGGA.
ProtClustDB	PRK09404.
Enzyme and pathway databases
BioCyc	LHON557598:GHO5-2399-MONOMER.
Family and domain databases
InterPro	IPR011603. 2oxoglutarate_DH_E1. IPR001017. DH_E1. IPR005475. Transketolase-like_Pyr-bd. [Graphical view]
PANTHER	PTHR23152. PTHR23152. 1 hit.
Pfam	PF00676. E1_dh. 1 hit. PF02779. Transket_pyr. 1 hit. [Graphical view]
PIRSF	PIRSF000157. Oxoglu_dh_E1. 1 hit.
SMART	SM00861. Transket_pyr. 1 hit. [Graphical view]
TIGRFAMs	TIGR00239. 2oxo_dh_E1. 1 hit.
ProtoNet	Search...

Entry information

Entry name

C1DB59_LARHH

Accession

Primary (citable) accession number: C1DB59

Entry history

Integrated into UniProtKB/TrEMBL:	May 26, 2009
Last sequence update:	May 26, 2009
Last modified:	May 1, 2013
This is version 25 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)