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C1DB59 (C1DB59_LARHH) Unreviewed, UniProtKB/TrEMBL

Last modified April 16, 2014. Version 30. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein attributes

Sequence length939 AA.
Sequence statusComplete.
Protein existencePredicted

Sequences

Sequence LengthMass (Da)Tools
C1DB59 [UniParc].

Last modified May 26, 2009. Version 1.
Checksum: 9E450A1D333BE37B

FASTA939105,248
        10         20         30         40         50         60 
MMQAAISHSY LFGGNAPFIE ELYEQYLDDP ATVSAEWREY FDKLQQTGGA TRDVPHQPIQ 

        70         80         90        100        110        120 
ESFIQLAKTP RVFVNKPSEA TWEAMQKQVA VLKLISAYRV LGSRWATLDP LKRMDTQPVP 

       130        140        150        160        170        180 
ELDPAYHGLT DTDMAQVFNT GSFVGLASGS LSEILGTLKQ TYCGNIGLEY MHIIDSKQKR 

       190        200        210        220        230        240 
WVQNYFEGSR STPRYDAAKK RSILKQVTAA ETLERYLHTK YVGQKRFSLE GGESMIAALD 

       250        260        270        280        290        300 
HLIQNATGFG VKELIVGMAH RGRLNVLVNT LGKLPRDLFS EFEGRPAVEL PSGDVKYHMG 

       310        320        330        340        350        360 
YSSDIPTQNG PMHVSLAFNP SHLEIVNPVV EGSVRARQQR RRDTERREVV PVLIHGDAAF 

       370        380        390        400        410        420 
GGLGVNQGTF NLSGTRGYGT GGTLHFVVNN QIGFTTSDTR DMRSSMYATD IAKMVDAPIF 

       430        440        450        460        470        480 
HVNGDDPEAV CFVMQAALEF RMQFKKDVVV DMVCFRKLGH NEGDDPMLTQ PMMYKKIVQH 

       490        500        510        520        530        540 
PGVRARYVER LVQEGSIDAS EADSLISAYR AALDKGEHVE QTVLSNYTRE FKLDWTPYIG 

       550        560        570        580        590        600 
THWAHPTDTT LPTADLQRLA DKLTTVPEGF KLHPTVSKLL AARREMAAGN QAVDWGMAET 

       610        620        630        640        650        660 
LAYASLVESG YGVRLSGEDS GRGTFSHRHS VLHDQNRERW DAGAYVPLRN LSDNQAEFLV 

       670        680        690        700        710        720 
IDSILNEEAV LAYEYGYACS SPKELTIWEA QFGDFANGAQ VAIDQFIVSG ETKWGRLCGL 

       730        740        750        760        770        780 
TMILPHGYDG QGPEHSSARV ERYLQLCAEH NVQVVMPSTA AQMFHVLRRQ MLRPYRKPLI 

       790        800        810        820        830        840 
IPMSKRLLRY KESMSPLADF TSGGFKPVIG EIEALDAKKV KRVVLCAGQV YYDLLNARRE 

       850        860        870        880        890        900 
RDIQDIAIVR VEQLYPFPTE QLAAELAQYT NARELMWVQE EPKNQGAWYQ IRHRLERQLA 

       910        920        930 
PKQTLLFAGR PSSASPAVGY MSKHVAQLKA FLEEAMTLG 

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References

[1]"The complete genome and proteome of Laribacter hongkongensis reveal potential mechanisms for adaptations to different temperatures and habitats."
Woo P.C., Lau S.K., Tse H., Teng J.L., Curreem S.O., Tsang A.K., Fan R.Y., Wong G.K., Huang Y., Loman N.J., Snyder L.A., Cai J.J., Huang J.D., Mak W., Pallen M.J., Lok S., Yuen K.Y.
PLoS Genet. 5:E1000416-E1000416(2009) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: HLHK9 EMBL ACO75398.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP001154 Genomic DNA. Translation: ACO75398.1.
RefSeqYP_002796407.1. NC_012559.1.

3D structure databases

ProteinModelPortalC1DB59.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING557598.LHK_02416.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaACO75398; ACO75398; LHK_02416.
GeneID7758027.
KEGGlhk:LHK_02416.
PATRIC22301659. VBILarHon49832_2211.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG0567.
HOGENOMHOG000259587.
KOK00164.
OMAHILRRQL.
OrthoDBEOG6V1M1F.
ProtClustDBPRK09404.

Enzyme and pathway databases

BioCycLHON557598:GHO5-2451-MONOMER.

Family and domain databases

InterProIPR011603. 2oxoglutarate_DH_E1.
IPR001017. DH_E1.
IPR005475. Transketolase-like_Pyr-bd.
[Graphical view]
PANTHERPTHR23152. PTHR23152. 1 hit.
PfamPF00676. E1_dh. 1 hit.
PF02779. Transket_pyr. 1 hit.
[Graphical view]
PIRSFPIRSF000157. Oxoglu_dh_E1. 1 hit.
SMARTSM00861. Transket_pyr. 1 hit.
[Graphical view]
TIGRFAMsTIGR00239. 2oxo_dh_E1. 1 hit.
ProtoNetSearch...

Entry information

Entry nameC1DB59_LARHH
AccessionPrimary (citable) accession number: C1DB59
Entry history
Integrated into UniProtKB/TrEMBL: May 26, 2009
Last sequence update: May 26, 2009
Last modified: April 16, 2014
This is version 30 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)