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C1DB59

- C1DB59_LARHH

UniProt

C1DB59 - C1DB59_LARHH

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Protein
Submitted name: Kgd
Gene
kgd, LHK_02416
Organism
Laribacter hongkongensis (strain HLHK9)
Status
Unreviewed - Annotation score: 1 out of 5 - Protein predictedi

Functioni

GO - Molecular functioni

  1. oxoglutarate dehydrogenase (succinyl-transferring) activity Source: UniProtKB-EC
  2. thiamine pyrophosphate binding Source: InterPro
Complete GO annotation...

GO - Biological processi

  1. tricarboxylic acid cycle Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

OxidoreductaseImported

Enzyme and pathway databases

BioCyciLHON557598:GHO5-2451-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
KgdImported (EC:1.2.4.2Imported)
Gene namesi
Name:kgdImported
Ordered Locus Names:LHK_02416Imported
OrganismiLaribacter hongkongensis (strain HLHK9)Imported
Taxonomic identifieri557598 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaBetaproteobacteriaNeisserialesChromobacteriaceaeLaribacter
ProteomesiUP000002010: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi557598.LHK_02416.

Structurei

3D structure databases

ProteinModelPortaliC1DB59.

Family & Domainsi

Phylogenomic databases

eggNOGiCOG0567.
HOGENOMiHOG000259587.
KOiK00164.
OMAiGHQNANL.
OrthoDBiEOG6V1M1F.

Family and domain databases

Gene3Di3.40.50.970. 2 hits.
InterProiIPR011603. 2oxoglutarate_DH_E1.
IPR001017. DH_E1.
IPR029061. THDP-binding.
IPR005475. Transketolase-like_Pyr-bd.
[Graphical view]
PANTHERiPTHR23152. PTHR23152. 1 hit.
PfamiPF00676. E1_dh. 1 hit.
PF02779. Transket_pyr. 1 hit.
[Graphical view]
PIRSFiPIRSF000157. Oxoglu_dh_E1. 1 hit.
SMARTiSM00861. Transket_pyr. 1 hit.
[Graphical view]
SUPFAMiSSF52518. SSF52518. 2 hits.
TIGRFAMsiTIGR00239. 2oxo_dh_E1. 1 hit.

Sequencei

Sequence statusi: Complete.

C1DB59-1 [UniParc]FASTAAdd to Basket

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MMQAAISHSY LFGGNAPFIE ELYEQYLDDP ATVSAEWREY FDKLQQTGGA    50
TRDVPHQPIQ ESFIQLAKTP RVFVNKPSEA TWEAMQKQVA VLKLISAYRV 100
LGSRWATLDP LKRMDTQPVP ELDPAYHGLT DTDMAQVFNT GSFVGLASGS 150
LSEILGTLKQ TYCGNIGLEY MHIIDSKQKR WVQNYFEGSR STPRYDAAKK 200
RSILKQVTAA ETLERYLHTK YVGQKRFSLE GGESMIAALD HLIQNATGFG 250
VKELIVGMAH RGRLNVLVNT LGKLPRDLFS EFEGRPAVEL PSGDVKYHMG 300
YSSDIPTQNG PMHVSLAFNP SHLEIVNPVV EGSVRARQQR RRDTERREVV 350
PVLIHGDAAF GGLGVNQGTF NLSGTRGYGT GGTLHFVVNN QIGFTTSDTR 400
DMRSSMYATD IAKMVDAPIF HVNGDDPEAV CFVMQAALEF RMQFKKDVVV 450
DMVCFRKLGH NEGDDPMLTQ PMMYKKIVQH PGVRARYVER LVQEGSIDAS 500
EADSLISAYR AALDKGEHVE QTVLSNYTRE FKLDWTPYIG THWAHPTDTT 550
LPTADLQRLA DKLTTVPEGF KLHPTVSKLL AARREMAAGN QAVDWGMAET 600
LAYASLVESG YGVRLSGEDS GRGTFSHRHS VLHDQNRERW DAGAYVPLRN 650
LSDNQAEFLV IDSILNEEAV LAYEYGYACS SPKELTIWEA QFGDFANGAQ 700
VAIDQFIVSG ETKWGRLCGL TMILPHGYDG QGPEHSSARV ERYLQLCAEH 750
NVQVVMPSTA AQMFHVLRRQ MLRPYRKPLI IPMSKRLLRY KESMSPLADF 800
TSGGFKPVIG EIEALDAKKV KRVVLCAGQV YYDLLNARRE RDIQDIAIVR 850
VEQLYPFPTE QLAAELAQYT NARELMWVQE EPKNQGAWYQ IRHRLERQLA 900
PKQTLLFAGR PSSASPAVGY MSKHVAQLKA FLEEAMTLG 939
Length:939
Mass (Da):105,248
Last modified:May 26, 2009 - v1
Checksum:i9E450A1D333BE37B
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP001154 Genomic DNA. Translation: ACO75398.1.
RefSeqiYP_002796407.1. NC_012559.1.

Genome annotation databases

EnsemblBacteriaiACO75398; ACO75398; LHK_02416.
GeneIDi7758027.
KEGGilhk:LHK_02416.
PATRICi22301659. VBILarHon49832_2211.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP001154 Genomic DNA. Translation: ACO75398.1 .
RefSeqi YP_002796407.1. NC_012559.1.

3D structure databases

ProteinModelPortali C1DB59.
ModBasei Search...

Protein-protein interaction databases

STRINGi 557598.LHK_02416.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai ACO75398 ; ACO75398 ; LHK_02416 .
GeneIDi 7758027.
KEGGi lhk:LHK_02416.
PATRICi 22301659. VBILarHon49832_2211.

Phylogenomic databases

eggNOGi COG0567.
HOGENOMi HOG000259587.
KOi K00164.
OMAi GHQNANL.
OrthoDBi EOG6V1M1F.

Enzyme and pathway databases

BioCyci LHON557598:GHO5-2451-MONOMER.

Family and domain databases

Gene3Di 3.40.50.970. 2 hits.
InterProi IPR011603. 2oxoglutarate_DH_E1.
IPR001017. DH_E1.
IPR029061. THDP-binding.
IPR005475. Transketolase-like_Pyr-bd.
[Graphical view ]
PANTHERi PTHR23152. PTHR23152. 1 hit.
Pfami PF00676. E1_dh. 1 hit.
PF02779. Transket_pyr. 1 hit.
[Graphical view ]
PIRSFi PIRSF000157. Oxoglu_dh_E1. 1 hit.
SMARTi SM00861. Transket_pyr. 1 hit.
[Graphical view ]
SUPFAMi SSF52518. SSF52518. 2 hits.
TIGRFAMsi TIGR00239. 2oxo_dh_E1. 1 hit.
ProtoNeti Search...

Publicationsi

  1. "The complete genome and proteome of Laribacter hongkongensis reveal potential mechanisms for adaptations to different temperatures and habitats."
    Woo P.C., Lau S.K., Tse H., Teng J.L., Curreem S.O., Tsang A.K., Fan R.Y., Wong G.K., Huang Y., Loman N.J., Snyder L.A., Cai J.J., Huang J.D., Mak W., Pallen M.J., Lok S., Yuen K.Y.
    PLoS Genet. 5:E1000416-E1000416(2009) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: HLHK9Imported.

Entry informationi

Entry nameiC1DB59_LARHH
AccessioniPrimary (citable) accession number: C1DB59
Entry historyi
Integrated into UniProtKB/TrEMBL: May 26, 2009
Last sequence update: May 26, 2009
Last modified: July 9, 2014
This is version 33 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome

External Data

Dasty 3

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