C1DB35 (C1DB35_LARHH) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
RibE EMBL ACO75374.1
EC=2.5.1.9 EMBL ACO75374.1

Gene names

Name:	ribE EMBL ACO75374.1
Ordered Locus Names:	LHK_02392

Organism

Laribacter hongkongensis (strain HLHK9) [Complete proteome] [HAMAP]

Taxonomic identifier

557598 [NCBI]

Taxonomic lineage

Bacteria › Proteobacteria › Betaproteobacteria › Neisseriales › Neisseriaceae › Laribacter

Protein attributes

Sequence length	205 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Molecular function	Transferase EMBL ACO75374.1
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	riboflavin biosynthetic process Inferred from electronic annotation. Source: InterPro
Molecular function	oxidoreductase activity Inferred from electronic annotation. Source: InterPro riboflavin synthase activity Inferred from electronic annotation. Source: EC
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	C1DB35 [UniParc]. Last modified May 26, 2009. Version 1. Checksum: 076ECEE859EDA2A6	FASTA	205	21,933
	10 20 30 40 50 60 MFTGIVAGTA EVVALTEKTA FRTHVVRLPA GLLPGLATGA SVAHNGVCLT VTSVDGDLVS 70 80 90 100 110 120 FDLMQETLRV TNLGELQVGD RVNVERAARF GDDIGGHAMS GHVMATAVIT RVIDTPDNRT 130 140 150 160 170 180 VWFRLPDELA KFVFTKGYIG IDGCSLTIGA VEHAGFCVHL IPETLARTNL GWRQAGERVN 190 200 IEIDPQTQVI VETVERVLAG RGDGR

References

[1]

"The complete genome and proteome of Laribacter hongkongensis reveal potential mechanisms for adaptations to different temperatures and habitats." Woo P.C.Y., Lau S.K.P., Tse H., Teng J.L.L., Curreem S.O., Tsang A.K.L., Fan R.Y.Y., Wong G.K.M., Huang Y., Loman N.J., Snyder L.A.S., Cai J.J., Huang J.-D., Mak W., Pallen M.J., Lok S., Yuen K.-Y. PLoS Genet. 5:E1000416-E1000416(2009) [PubMed: 19283063] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP001154 Genomic DNA. Translation: ACO75374.1.
RefSeq	YP_002796383.1. NC_012559.1.
3D structure databases
ModBase	Search...
Protein-protein interaction databases
STRING	C1DB35.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	7758003.
GenomeReviews	Gene locus LHK_02392 in contig CP001154_GR.
KEGG	lhk:LHK_02392.
PATRIC	22301611. VBILarHon49832_2187.
Organism-specific databases
CMR	Search...
Phylogenomic databases
OMA	HILSGHV.
ProtClustDB	PRK13020.
Family and domain databases
InterPro	IPR023366. ATPase_F1/A1-cplx_a_su_N. IPR001783. Lumazine-bd. IPR017938. Riboflavin_synthase-like_b-brl. [Graphical view]
Gene3D	G3DSA:2.40.30.20. G3DSA:2.40.30.20. 2 hits.
KO	K00793.
PANTHER	PTHR21098. Lumazine_bd. 1 hit.
Pfam	PF00677. Lum_binding. 2 hits. [Graphical view]
PIRSF	PIRSF000498. Riboflavin_syn_A. 1 hit.
SUPFAM	SSF63380. Riboflavin_synthase_like_b-brl. 2 hits.
TIGRFAMs	TIGR00187. RibE. 1 hit.
PROSITE	PS51177. LUMAZINE_BIND. 2 hits. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

C1DB35_LARHH

Accession

Primary (citable) accession number: C1DB35

Entry history

Integrated into UniProtKB/TrEMBL:	May 26, 2009
Last sequence update:	May 26, 2009
Last modified:	December 14, 2011
This is version 17 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)