Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.
Protein
Submitted name:

Exonuclease

Gene

LHK_01497

Organism
Laribacter hongkongensis (strain HLHK9)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at protein leveli

Functioni

Sites

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Metal bindingi102MagnesiumCombined sources1
Metal bindingi112MagnesiumCombined sources1
Metal bindingi113Magnesium; via carbonyl oxygenCombined sources1

GO - Molecular functioni

Keywordsi

Molecular functionExonucleaseImported, Hydrolase, Nuclease
LigandMagnesiumCombined sources, Metal-bindingCombined sources

Names & Taxonomyi

Protein namesi
Submitted name:
ExonucleaseImported
Gene namesi
Ordered Locus Names:LHK_01497Imported
OrganismiLaribacter hongkongensis (strain HLHK9)Imported
Taxonomic identifieri557598 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaBetaproteobacteriaNeisserialesChromobacteriaceaeLaribacter
Proteomesi
  • UP000002010 Componenti: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi557598.LHK_01497.

Structurei

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
PDB entryMethodResolution (Å)ChainPositionsPDBsum
3SYYX-ray1.90A1-203[»]
3SZ4X-ray2.59A1-203[»]
3SZ5X-ray2.80A1-203[»]
SMRiC1D7P6.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini7 – 148YqaJInterPro annotationAdd BLAST142

Phylogenomic databases

eggNOGiENOG4105RMG. Bacteria.
ENOG4111FJH. LUCA.
HOGENOMiHOG000226545.
OMAiARATFEF.
OrthoDBiPOG091H0HT2.

Family and domain databases

Gene3Di3.90.320.10. 1 hit.
InterProiView protein in InterPro
IPR011604. Exonuc_phg/RecB_C.
IPR017482. Phage_endonuclease_put.
IPR011335. Restrct_endonuc-II-like.
IPR019080. YqaJ_viral_recombinase.
PfamiView protein in Pfam
PF09588. YqaJ. 1 hit.
SUPFAMiSSF52980. SSF52980. 1 hit.
TIGRFAMsiTIGR03033. phage_rel_nuc. 1 hit.

Sequencei

Sequence statusi: Complete.

C1D7P6-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MEQRTEEWFA ARLGKVTASR VADVMTKTKS GYAASRQNYM AELICQRLTG
60 70 80 90 100
TQEIRFSNAA MQRGTELEPH ARARYIIETG EIVTEVGLID HPTIAGFGAS
110 120 130 140 150
PDGLVGDTGL IEIKCPNTWT HIETIKTGKP KPEYIKQMQT QMACTGRQWC
160 170 180 190 200
DFVSYDDRLP DDMQYFCTRI ERDDALIAEI ETEVSAFLAE LEAEIEYLKR

KAA
Length:203
Mass (Da):22,923
Last modified:May 26, 2009 - v1
Checksum:i8277A2B1701531AB
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP001154 Genomic DNA. Translation: ACO74486.1.
RefSeqiWP_012696972.1. NC_012559.1.

Genome annotation databases

EnsemblBacteriaiACO74486; ACO74486; LHK_01497.
KEGGilhk:LHK_01497.

Similar proteinsi

Entry informationi

Entry nameiC1D7P6_LARHH
AccessioniPrimary (citable) accession number: C1D7P6
Entry historyiIntegrated into UniProtKB/TrEMBL: May 26, 2009
Last sequence update: May 26, 2009
Last modified: October 25, 2017
This is version 56 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

3D-structureCombined sources, Complete proteome, Reference proteomeImported