C1D6M5 (C1D6M5_LARHH) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
SpeB EMBL ACO74132.1
EC=3.5.3.11 EMBL ACO74132.1

Gene names

Name:	speB EMBL ACO74132.1
Ordered Locus Names:	LHK_01140

Organism

Laribacter hongkongensis (strain HLHK9) [Complete proteome] [HAMAP]

Taxonomic identifier

557598 [NCBI]

Taxonomic lineage

Bacteria › Proteobacteria › Betaproteobacteria › Neisseriales › Neisseriaceae › Laribacter

Protein attributes

Sequence length	320 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Cofactor	Manganese By similarity. RuleBase RU003684
Sequence similarities	Belongs to the arginase family. RuleBase RU003684

Ontologies

Keywords
Ligand	Manganese RuleBase RU003684 Metal-binding SAAS SAAS005925 RuleBase RU003684
Molecular function	Hydrolase RuleBase RU003684 SAAS SAAS005925 EMBL ACO74132.1
Technical term	Complete proteome
Gene Ontology (GO)
Molecular function	agmatinase activity Inferred from electronic annotation. Source: EC metal ion binding Inferred from electronic annotation. Source: UniProtKB-KW
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	C1D6M5 [UniParc]. Last modified May 26, 2009. Version 1. Checksum: 934E37D5264C32C8	FASTA	320	34,808
	10 20 30 40 50 60 MTEIIGDGAF RRPGLYGSTI ENTYAGALSF MRRNYTRDLT GVDVAVSGIP LDLAVTFRPG 70 80 90 100 110 120 ARLGPQAVRA ASVQLAELKP FPWGFDPFED LAVVDYGDCW FDAHNPLTIK DSIVNHARTI 130 140 150 160 170 180 INAGARMLTF GGDHYVTYPL LIAHAEKYGK PLSLIHFDAH CDTWPDDSPD SLNHGTMFYK 190 200 210 220 230 240 AVKDGLIDPA RSVQVGIRTW NDDFMGIQRL DAPTVHEIGV DETIRRILAI VGDNPTYLTF 250 260 270 280 290 300 DIDCLDPAFA PGTGTPVPGG LTSAQALKII RNMGDVNLVG MDVVEVSPPF DQSEITAIAA 310 320 AHIACDLLCV LRNRKLAGKL

References

[1]

"The complete genome and proteome of Laribacter hongkongensis reveal potential mechanisms for adaptations to different temperatures and habitats." Woo P.C.Y., Lau S.K.P., Tse H., Teng J.L.L., Curreem S.O., Tsang A.K.L., Fan R.Y.Y., Wong G.K.M., Huang Y., Loman N.J., Snyder L.A.S., Cai J.J., Huang J.-D., Mak W., Pallen M.J., Lok S., Yuen K.-Y. PLoS Genet. 5:E1000416-E1000416(2009) [PubMed: 19283063] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP001154 Genomic DNA. Translation: ACO74132.1.
RefSeq	YP_002795141.1. NC_012559.1.
3D structure databases
ProteinModelPortal	C1D6M5.
ModBase	Search...
Protein-protein interaction databases
STRING	C1D6M5.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	7756762.
GenomeReviews	Gene locus LHK_01140 in contig CP001154_GR.
KEGG	lhk:LHK_01140.
PATRIC	22299349. VBILarHon49832_1072.
Organism-specific databases
CMR	Search...
Phylogenomic databases
OMA	AHNPLTI.
ProtClustDB	PRK02190.
Family and domain databases
InterPro	IPR005925. Agmatinase-rel. IPR006035. Ureohydrolase. IPR023696. Ureohydrolase_domain. IPR020855. Ureohydrolase_Mn_BS. [Graphical view]
Gene3D	G3DSA:3.40.800.10. Ureohydrolase. 1 hit.
KO	K01480.
PANTHER	PTHR11358. Ureohydrolase. 1 hit.
Pfam	PF00491. Arginase. 1 hit. [Graphical view]
PIRSF	PIRSF036979. Arginase. 1 hit.
TIGRFAMs	TIGR01230. Agmatinase. 1 hit.
PROSITE	PS01053. ARGINASE_1. 1 hit. PS51409. ARGINASE_2. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

C1D6M5_LARHH

Accession

Primary (citable) accession number: C1D6M5

Entry history

Integrated into UniProtKB/TrEMBL:	May 26, 2009
Last sequence update:	May 26, 2009
Last modified:	December 14, 2011
This is version 20 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)