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C1D5R1 (C1D5R1_LARHH) Unreviewed, UniProtKB/TrEMBL

Last modified December 14, 2011. Version 17. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesRecommended name:
Glycerol kinase HAMAP MF_00186
EC=2.7.1.30 HAMAP MF_00186
Alternative name(s):
ATP:glycerol 3-phosphotransferase HAMAP MF_00186
Glycerokinase HAMAP MF_00186
Gene names
Name:glpK2 EMBL ACO76078.1
Synonyms:glpK HAMAP MF_00186
Ordered Locus Names:LHK_03100
OrganismLaribacter hongkongensis (strain HLHK9) [Complete proteome] [HAMAP]
Taxonomic identifier557598 [NCBI]
Taxonomic lineageBacteria › Proteobacteria › Betaproteobacteria › Neisseriales › Neisseriaceae › Laribacter

Protein attributes

Sequence length492 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Function

Key enzyme in the regulation of glycerol uptake and metabolism By similarity. HAMAP MF_00186 SAAS SAAS018483

Catalytic activity

ATP + glycerol = ADP + sn-glycerol 3-phosphate. HAMAP MF_00186 SAAS SAAS018483

Pathway

Polyol metabolism; glycerol degradation via glycerol kinase pathway; sn-glycerol 3-phosphate from glycerol: step 1/1. HAMAP MF_00186 SAAS SAAS018483

Sequence similarities

Belongs to the FGGY kinase family. HAMAP MF_00186 RuleBase RU003733

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Regions

Nucleotide binding403 – 4075ATP By similarity HAMAP MF_00186

Sites

Binding site121Substrate By similarity HAMAP MF_00186
Binding site161ATP By similarity HAMAP MF_00186
Binding site811Substrate By similarity HAMAP MF_00186
Binding site1311Substrate By similarity HAMAP MF_00186
Binding site2381Substrate By similarity HAMAP MF_00186
Binding site2601ATP By similarity HAMAP MF_00186
Binding site3031ATP; via carbonyl oxygen By similarity HAMAP MF_00186

Sequences

Sequence LengthMass (Da)Tools
C1D5R1 [UniParc].

Last modified May 26, 2009. Version 1.
Checksum: 2D025C45E479AEAE

FASTA49253,410
        10         20         30         40         50         60 
MSGFLLAIDQ GTTSSRAMVF DRHSRVVARA SRELEQFFPA PGWVEHDPDA LWRDVEAVTR 

        70         80         90        100        110        120 
EALAALPDGA AIAAIGLTNQ RETTLLWNRR TGRPLHRAIV WQDRRTAPLC EQLAGQAAMV 

       130        140        150        160        170        180 
QARTGLLLDP YFSATKLRWL LDTVPGAQEA ACRGELAFGT VDSWLLWQLT EGRVHATDAT 

       190        200        210        220        230        240 
NAARTLLFNI HTQTWDDELL ALFDIPRSLL PEVRDSAADF GETRLFGAPL PIRGVAGDQQ 

       250        260        270        280        290        300 
AAMIGQACFA PGMVKSTYGT GCFMVMNTGS VPLVSRHRLL TTVAYRLDGR PTYALEGSIF 

       310        320        330        340        350        360 
IAGAAVQWLR DALRLIAHAG QTEALARELD SNDGVYLVPA FTGLGVPYWD PLARGTITGL 

       370        380        390        400        410        420 
SRDTGINHIV RAALESVCYQ SRDLLDAMRA DGVAPASLRV DGGMAANDWL MQFLADMLAL 

       430        440        450        460        470        480 
PVERPALTET TALGAAWLAG LGCGWYAGLD ELAVQWHRQA DFAPQMAADR RDGLYAGWRA 

       490 
AVERTLSGGV SG

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References

[1]"The complete genome and proteome of Laribacter hongkongensis reveal potential mechanisms for adaptations to different temperatures and habitats."
Woo P.C.Y., Lau S.K.P., Tse H., Teng J.L.L., Curreem S.O., Tsang A.K.L., Fan R.Y.Y., Wong G.K.M., Huang Y., Loman N.J., Snyder L.A.S., Cai J.J., Huang J.-D., Mak W., Pallen M.J., Lok S., Yuen K.-Y.
PLoS Genet. 5:E1000416-E1000416(2009) [PubMed: 19283063] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		CP001154 Genomic DNA. Translation: ACO76078.1.
RefSeqYP_002797087.1. NC_012559.1.

3D structure databases

ProteinModelPortalC1D5R1.
ModBaseSearch...

Protein-protein interaction databases

STRINGC1D5R1.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID7758707.
GenomeReviewsGene locus LHK_03100 in contig CP001154_GR.
KEGGlhk:LHK_03100.
PATRIC22302954. VBILarHon49832_2831.

Organism-specific databases

CMRSearch...

Phylogenomic databases

OMACYQTRDL.

Family and domain databases

HAMAPMF_00186. Glycerol_kin.
[Tree]
InterProIPR000577. Carb_kinase_FGGY.
IPR018485. Carb_kinase_FGGY_C.
IPR018483. Carb_kinase_FGGY_CS.
IPR018484. Carb_kinase_FGGY_N.
IPR005999. Glycerol_kin.
[Graphical view]
KOK00864.
PANTHERPTHR10196. FGGY_kin. 1 hit.
PTHR10196:SF9. Glycerol_kin. 1 hit.
PfamPF02782. FGGY_C. 1 hit.
PF00370. FGGY_N. 1 hit.
[Graphical view]
TIGRFAMsTIGR01311. Glycerol_kin. 1 hit.
PROSITEPS00445. FGGY_KINASES_2. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameC1D5R1_LARHH
AccessionPrimary (citable) accession number: C1D5R1
Entry history
Integrated into UniProtKB/TrEMBL: May 26, 2009
Last sequence update: May 26, 2009
Last modified: December 14, 2011
This is version 17 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
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