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C1D2N8 (C1D2N8_DEIDV) Unreviewed, UniProtKB/TrEMBL

Last modified December 14, 2011. Version 17. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesRecommended name:
Glycerol kinase HAMAP MF_00186
EC=2.7.1.30 HAMAP MF_00186
Alternative name(s):
ATP:glycerol 3-phosphotransferase HAMAP MF_00186
Glycerokinase HAMAP MF_00186
Gene names
Name:glpK HAMAP MF_00186
Ordered Locus Names:Deide_2p00220
Encoded onPlasmid pDeide2
OrganismDeinococcus deserti (strain VCD115 / DSM 17065 / LMG 22923) [Complete proteome] [HAMAP]
Taxonomic identifier546414 [NCBI]
Taxonomic lineageBacteria › Deinococcus-Thermus › Deinococci › Deinococcales › Deinococcaceae › Deinococcus

Protein attributes

Sequence length499 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Function

Key enzyme in the regulation of glycerol uptake and metabolism By similarity. HAMAP MF_00186 SAAS SAAS018483

Catalytic activity

ATP + glycerol = ADP + sn-glycerol 3-phosphate. HAMAP MF_00186 SAAS SAAS018483

Pathway

Polyol metabolism; glycerol degradation via glycerol kinase pathway; sn-glycerol 3-phosphate from glycerol: step 1/1. HAMAP MF_00186 SAAS SAAS018483

Sequence similarities

Belongs to the FGGY kinase family. HAMAP MF_00186 RuleBase RU003733

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Regions

Nucleotide binding409 – 4135ATP By similarity HAMAP MF_00186

Sites

Binding site121Substrate By similarity HAMAP MF_00186
Binding site161ATP By similarity HAMAP MF_00186
Binding site821Substrate By similarity HAMAP MF_00186
Binding site1341Substrate By similarity HAMAP MF_00186
Binding site2431Substrate By similarity HAMAP MF_00186
Binding site2651ATP By similarity HAMAP MF_00186
Binding site3081ATP; via carbonyl oxygen By similarity HAMAP MF_00186

Sequences

Sequence LengthMass (Da)Tools
C1D2N8 [UniParc].

Last modified May 26, 2009. Version 1.
Checksum: 94EF8B2F2650C4F6

FASTA49954,708
        10         20         30         40         50         60 
MSQFILALDQ GTTSSRAIVF DQEGNIRRVA QKEFRQIFPK PGWVEHDAQE IWSTQIGVAQ 

        70         80         90        100        110        120 
EAISGAGLKA SDIAAIGITN QRETVVVWDR HTGQPIHNAI VWQDRRTSTF CDQLRAQGHA 

       130        140        150        160        170        180 
ELFQHKTGLL IDAYFSGTKL KWILDHVEGA RERALKGELA FGTVDSWLIY NLTGGALHVT 

       190        200        210        220        230        240 
DATNACRTLL YNIHTGEWDD ELLRILDVPR EVLPRVCSSS EVYGETAEGL LGARIRIAGI 

       250        260        270        280        290        300 
AGDQQAATFG QACLERGMAK NTYGTGCFML MNTAHEAVPS KNQLLTTVAW QLGGTRTYAL 

       310        320        330        340        350        360 
EGSVFVAGAV VQWLRDGLGI IRDSSEVEAL ATSVDSSEGV FLVPAFVGLG APYWDSYARG 

       370        380        390        400        410        420 
TMVGLTRGTT KAHIARAALE SIAYQSAELL EAMGQDSGAP LRELRVDGGA STNNLLMQFQ 

       430        440        450        460        470        480 
ADILGVPVVR PKVTETTALG AAYLAGLAVG YWQGTEEITR QWQVDRIFEP QMAEDERARR 

       490 
LARWRSAVQR SREWEIAEA

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References

[1]"Alliance of proteomics and genomics to unravel the specificities of Sahara bacterium Deinococcus deserti."
de Groot A., Dulermo R., Ortet P., Blanchard L., Guerin P., Fernandez B., Vacherie B., Dossat C., Jolivet E., Siguier P., Chandler M., Barakat M., Dedieu A., Barbe V., Heulin T., Sommer S., Achouak W., Armengaud J.
PLoS Genet. 5:E1000434-E1000434(2009) [PubMed: 19370165] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: VCD115 / DSM 17065 / LMG 22923.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		CP001116 Genomic DNA. Translation: ACO47677.1.
RefSeqYP_002787779.1. NC_012529.1.

3D structure databases

ProteinModelPortalC1D2N8.
ModBaseSearch...

Protein-protein interaction databases

STRINGC1D2N8.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID7740544.
GenomeReviewsGene locus Deide_2p00220 in contig CP001116_GR.
KEGGddr:Deide_2p00220.
PATRIC21620207. VBIDeiDes121019_3368.

Organism-specific databases

CMRSearch...

Phylogenomic databases

OMAALYGQLC.
ProtClustDBCLSK445316.

Family and domain databases

HAMAPMF_00186. Glycerol_kin.
[Tree]
InterProIPR000577. Carb_kinase_FGGY.
IPR018485. Carb_kinase_FGGY_C.
IPR018483. Carb_kinase_FGGY_CS.
IPR018484. Carb_kinase_FGGY_N.
IPR005999. Glycerol_kin.
[Graphical view]
KOK00864.
PANTHERPTHR10196. FGGY_kin. 1 hit.
PTHR10196:SF9. Glycerol_kin. 1 hit.
PfamPF02782. FGGY_C. 1 hit.
PF00370. FGGY_N. 1 hit.
[Graphical view]
TIGRFAMsTIGR01311. Glycerol_kin. 1 hit.
PROSITEPS00933. FGGY_KINASES_1. 1 hit.
PS00445. FGGY_KINASES_2. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameC1D2N8_DEIDV
AccessionPrimary (citable) accession number: C1D2N8
Entry history
Integrated into UniProtKB/TrEMBL: May 26, 2009
Last sequence update: May 26, 2009
Last modified: December 14, 2011
This is version 17 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
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