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C1D0B4 (C1D0B4_DEIDV) Unreviewed, UniProtKB/TrEMBL

Last modified May 14, 2014. Version 34. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
Gene names
Ordered Locus Names:Deide_23470 EMBL ACO47383.1
OrganismDeinococcus deserti (strain VCD115 / DSM 17065 / LMG 22923) [Complete proteome] [HAMAP] EMBL ACO47383.1
Taxonomic identifier546414 [NCBI]
Taxonomic lineageBacteriaDeinococcus-ThermusDeinococciDeinococcalesDeinococcaceaeDeinococcus

Protein attributes

Sequence length504 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Sequence similarities

Belongs to the 2-oxoacid dehydrogenase family. RuleBase RU003423

Contains 1 lipoyl-binding domain.

Ontologies

Sequences

Sequence LengthMass (Da)Tools
C1D0B4 [UniParc].

Last modified May 26, 2009. Version 1.
Checksum: 7FA3AC5BFE2B340F

FASTA50453,698
        10         20         30         40         50         60 
MKEVLLPELA ESVVEGEILK WLVQEGDTIA LEQPLCEVMT DKVTVELPSP VAGVLRQRLA 

        70         80         90        100        110        120 
NEGDVVAVHA AIALIDETGG GASSSAPSAM QAIQDTAESP ATADAQLPPQ AQEEREQIGG 

       130        140        150        160        170        180 
SIVEASHLPK ADDDSSSLFK AFASDEQVKV QGLGGRTPAP QGAAQPVRND GRVLAVPAAR 

       190        200        210        220        230        240 
QLARELGLDL NRIQGSGPNG RIRVSDVLAQ TQGQTASSTA ASSMPASAPA PQPASTAQAA 

       250        260        270        280        290        300 
AQPAPASSKA AQGGLPVAPV QYRTPKGYEH LEDRVPLRGM RRAISNQMVA SHLYTVRTLT 

       310        320        330        340        350        360 
VDEVNLTRLV EFRNRVKDEA KAADVKLSYL PFIFKAVAVA LRKYPSLNTS FDEATQEIVQ 

       370        380        390        400        410        420 
KRYYNMGMAV ATDAGLTVPV LKDVGRKSVF ELAREVVDLA GRAQAGKLQP DELAGSTFSI 

       430        440        450        460        470        480 
TNIGSIGALF SFPIINVPDA AILGVHSIVK RPIVDEDDNI VVAHMMYLSL SFDHRLVDGA 

       490        500 
EAARFCKEVI RLLENPDRLM LEAM 

« Hide

References

[1]"Alliance of proteomics and genomics to unravel the specificities of Sahara bacterium Deinococcus deserti."
de Groot A., Dulermo R., Ortet P., Blanchard L., Guerin P., Fernandez B., Vacherie B., Dossat C., Jolivet E., Siguier P., Chandler M., Barakat M., Dedieu A., Barbe V., Heulin T., Sommer S., Achouak W., Armengaud J.
PLoS Genet. 5:E1000434-E1000434(2009) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: VCD115 / DSM 17065 / LMG 22923.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP001114 Genomic DNA. Translation: ACO47383.1.
RefSeqYP_002787137.1. NC_012526.1.

3D structure databases

ProteinModelPortalC1D0B4.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING546414.Deide_23470.

Proteomic databases

PaxDbC1D0B4.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaACO47383; ACO47383; Deide_23470.
GeneID7739898.
KEGGddr:Deide_23470.
PATRIC21618852. VBIDeiDes121019_2695.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG0508.
HOGENOMHOG000281564.
KOK00627.
OMAGAEAAMF.
OrthoDBEOG610413.

Enzyme and pathway databases

BioCycDDES546414:GHOM-2648-MONOMER.

Family and domain databases

Gene3D3.30.559.10. 1 hit.
4.10.320.10. 1 hit.
InterProIPR003016. 2-oxoA_DH_lipoyl-BS.
IPR001078. 2-oxoacid_DH_actylTfrase.
IPR000089. Biotin_lipoyl.
IPR023213. CAT-like_dom.
IPR004167. E3-bd.
IPR011053. Single_hybrid_motif.
[Graphical view]
PfamPF00198. 2-oxoacid_dh. 1 hit.
PF00364. Biotin_lipoyl. 1 hit.
PF02817. E3_binding. 1 hit.
[Graphical view]
SUPFAMSSF47005. SSF47005. 1 hit.
SSF51230. SSF51230. 1 hit.
PROSITEPS50968. BIOTINYL_LIPOYL. 1 hit.
PS00189. LIPOYL. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameC1D0B4_DEIDV
AccessionPrimary (citable) accession number: C1D0B4
Entry history
Integrated into UniProtKB/TrEMBL: May 26, 2009
Last sequence update: May 26, 2009
Last modified: May 14, 2014
This is version 34 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)