C1D060 (C1D060_DEIDV) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Recommended name:
5'-nucleotidase surE HAMAP MF_00060
EC=3.1.3.5 HAMAP MF_00060

Alternative name(s):
Nucleoside 5'-monophosphate phosphohydrolase HAMAP MF_00060

Gene names

Name:	surE HAMAP MF_00060 EMBL ACO47329.2
Ordered Locus Names:	Deide_22950 EMBL ACO47329.2

Organism

Deinococcus deserti (strain VCD115 / DSM 17065 / LMG 22923) [Complete proteome] [HAMAP]

Taxonomic identifier

546414 [NCBI]

Taxonomic lineage

Bacteria › Deinococcus-Thermus › Deinococci › Deinococcales › Deinococcaceae › Deinococcus

Protein attributes

Sequence length	263 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Function	Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates By similarity. HAMAP MF_00060
Catalytic activity	A 5'-ribonucleotide + H2O = a ribonucleoside + phosphate. HAMAP MF_00060 SAAS SAAS002828
Cofactor	Binds 1 divalent metal cation per subunit By similarity. HAMAP MF_00060 SAAS SAAS002828
Subcellular location	Cytoplasm By similarity HAMAP MF_00060 SAAS SAAS002828.
Sequence similarities	Belongs to the surE nucleotidase family. HAMAP MF_00060

Ontologies

Keywords
Cellular component	Cytoplasm HAMAP MF_00060 SAAS SAAS002828
Ligand	Metal-binding HAMAP MF_00060 SAAS SAAS002828 Nucleotide-binding HAMAP MF_00060 SAAS SAAS002828
Molecular function	Hydrolase HAMAP MF_00060 SAAS SAAS002828
Technical term	Complete proteome
Gene Ontology (GO)
Cellular component	cytoplasm Inferred from electronic annotation. Source: UniProtKB-SubCell
Molecular function	5'-nucleotidase activity Inferred from electronic annotation. Source: HAMAP metal ion binding Inferred from electronic annotation. Source: HAMAP nucleotide binding Inferred from electronic annotation. Source: UniProtKB-KW
Complete GO annotation...

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Sites
	Metal binding	14	1	Divalent metal cation By similarity HAMAP MF_00060
	Metal binding	15	1	Divalent metal cation By similarity HAMAP MF_00060
	Metal binding	45	1	Divalent metal cation By similarity HAMAP MF_00060
	Metal binding	101	1	Divalent metal cation By similarity HAMAP MF_00060

Sequences

	Sequence		Length	Mass (Da)
	C1D060 [UniParc]. Last modified March 8, 2011. Version 2. Checksum: 2AA7FC6F9C8B263F	FASTA	263	27,939
	10 20 30 40 50 60 MTATNKKKVL VANDDGVFSP GIKALGQAMA QIADVVVVAP DVEQSAVGHG ITIRRPLRFK 70 80 90 100 110 120 HTASAGFGDI PAYRVDGTPT DCVVMGVHLL GTPDLIVSGI NIGPNLGDDL THSGTVAAAI 130 140 150 160 170 180 EGLALGLPSI AFSQQAAPSG EYDFEASAAY AVRLAQQVLA RGLPPRVLLN VNFPHGVPKG 190 200 210 220 230 240 VRVTRVGEHR WEDTIVTRED PEGREYHWVA GTSRARDAHD EQTDYGAVQA GYISVTPVRL 250 260 DLTARDLLDE VSGYVPALEM QTD

References

[1]

"Alliance of proteomics and genomics to unravel the specificities of Sahara bacterium Deinococcus deserti." de Groot A., Dulermo R., Ortet P., Blanchard L., Guerin P., Fernandez B., Vacherie B., Dossat C., Jolivet E., Siguier P., Chandler M., Barakat M., Dedieu A., Barbe V., Heulin T., Sommer S., Achouak W., Armengaud J. PLoS Genet. 5:E1000434-E1000434(2009) [PubMed: 19370165] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: VCD115 / DSM 17065 / LMG 22923.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP001114 Genomic DNA. Translation: ACO47329.2.
RefSeq	YP_002787083.2. NC_012526.1.
3D structure databases
ModBase	Search...
Protein-protein interaction databases
STRING	C1D060.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	7739844.
GenomeReviews	Gene locus Deide_22950 in contig CP001114_GR.
KEGG	ddr:Deide_22950.
PATRIC	21618726. VBIDeiDes121019_2632.
Organism-specific databases
CMR	Search...
Family and domain databases
HAMAP	MF_00060. SurE. [Tree]
InterPro	IPR002828. SurE-like_Pase/nucleotidase. [Graphical view]
Gene3D	G3DSA:3.40.1210.10. SurE-like_Pase/nucleotidase. 1 hit.
KO	K03787.
Pfam	PF01975. SurE. 1 hit. [Graphical view]
SUPFAM	SSF64167. SurE-like_Pase/nucleotidase. 1 hit.
TIGRFAMs	TIGR00087. SurE. 1 hit.
ProtoNet	Search...

Entry information

Entry name

C1D060_DEIDV

Accession

Primary (citable) accession number: C1D060

Entry history

Integrated into UniProtKB/TrEMBL:	May 26, 2009
Last sequence update:	March 8, 2011
Last modified:	January 25, 2012
This is version 21 of the entry and version 2 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)