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C1CZJ0

- C1CZJ0_DEIDV

UniProt

C1CZJ0 - C1CZJ0_DEIDV

Protein
Submitted name:

Putative tRNA nucleotidyltransferase (Phosphate-dependent exonuclease) (Ribonuclease PH) (RNase PH)

Gene

rph

Organism
Deinococcus deserti (strain VCD115 / DSM 17065 / LMG 22923)
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi
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    • History
      Entry version 31 (01 Oct 2014)
      Sequence version 1 (26 May 2009)
      Previous versions | rss
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    Functioni

    Phosphorolytic exoribonuclease that removes nucleotide residues following the -CCA terminus of tRNA and adds nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates.SAAS annotation

    Catalytic activityi

    tRNA(n+1) + phosphate = tRNA(n) + a nucleoside diphosphate.SAAS annotation

    GO - Molecular functioni

    1. exonuclease activity Source: UniProtKB-KW
    2. nucleotidyltransferase activity Source: UniProtKB-KW
    3. tRNA binding Source: InterPro
    4. tRNA-specific ribonuclease activity Source: InterPro

    GO - Biological processi

    1. tRNA processing Source: UniProtKB-KW

    Keywords - Molecular functioni

    ExonucleaseImported, Hydrolase, Nuclease, NucleotidyltransferaseSAAS annotation, Transferase

    Keywords - Biological processi

    tRNA processingSAAS annotation

    Enzyme and pathway databases

    BioCyciDDES546414:GHOM-2503-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    Putative tRNA nucleotidyltransferase (Phosphate-dependent exonuclease) (Ribonuclease PH) (RNase PH)Imported
    Gene namesi
    Name:rphImported
    Ordered Locus Names:Deide_22100Imported
    OrganismiDeinococcus deserti (strain VCD115 / DSM 17065 / LMG 22923)Imported
    Taxonomic identifieri546414 [NCBI]
    Taxonomic lineageiBacteriaDeinococcus-ThermusDeinococciDeinococcalesDeinococcaceaeDeinococcus
    ProteomesiUP000002208: Chromosome

    Interactioni

    Protein-protein interaction databases

    STRINGi546414.Deide_22100.

    Family & Domainsi

    Phylogenomic databases

    eggNOGiCOG0689.
    HOGENOMiHOG000229516.
    KOiK00989.
    OMAiYTEDSAA.
    OrthoDBiEOG6CZQQP.

    Family and domain databases

    Gene3Di3.30.230.70. 1 hit.
    InterProiIPR001247. ExoRNase_PH_dom1.
    IPR015847. ExoRNase_PH_dom2.
    IPR027408. PNPase/RNase_PH_dom.
    IPR020568. Ribosomal_S5_D2-typ_fold.
    IPR002381. RNase_PH_bac-type.
    IPR018336. RNase_PH_CS.
    [Graphical view]
    PfamiPF01138. RNase_PH. 1 hit.
    PF03725. RNase_PH_C. 1 hit.
    [Graphical view]
    SUPFAMiSSF54211. SSF54211. 1 hit.
    SSF55666. SSF55666. 1 hit.
    TIGRFAMsiTIGR01966. RNasePH. 1 hit.
    PROSITEiPS01277. RIBONUCLEASE_PH. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    C1CZJ0-1 [UniParc]FASTAAdd to Basket

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    MTSVQPNKFP PREGRGLLEP RPVSVKRGVN PHAPGSAHLI MGRTEILATV    50
    TLEDKPAPHM RGKKEGWLTA EYSMLPRATN DRQARERNLQ NGRRHEIQRL 100
    LGRALRASVD LKYFRNQTIY VDCDVLVADG GTRVASILAG HAALHDFCDR 150
    LINSGQLSEW PLTHKVGAIS VGLVGEEVRV DLDYAEDKVA RADLNVVATD 200
    TGLVIEVQGG AEEGPISLAE YSQLLHTGVQ AIHGVMDELG RELAVIQGV 249
    Length:249
    Mass (Da):27,199
    Last modified:May 26, 2009 - v1
    Checksum:i973B2E5D06DF694E
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP001114 Genomic DNA. Translation: ACO47238.1.
    RefSeqiWP_012694359.1. NC_012526.1.
    YP_002786992.1. NC_012526.1.

    Genome annotation databases

    EnsemblBacteriaiACO47238; ACO47238; Deide_22100.
    GeneIDi7739753.
    KEGGiddr:Deide_22100.
    PATRICi21618532. VBIDeiDes121019_2535.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP001114 Genomic DNA. Translation: ACO47238.1 .
    RefSeqi WP_012694359.1. NC_012526.1.
    YP_002786992.1. NC_012526.1.

    3D structure databases

    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 546414.Deide_22100.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai ACO47238 ; ACO47238 ; Deide_22100 .
    GeneIDi 7739753.
    KEGGi ddr:Deide_22100.
    PATRICi 21618532. VBIDeiDes121019_2535.

    Phylogenomic databases

    eggNOGi COG0689.
    HOGENOMi HOG000229516.
    KOi K00989.
    OMAi YTEDSAA.
    OrthoDBi EOG6CZQQP.

    Enzyme and pathway databases

    BioCyci DDES546414:GHOM-2503-MONOMER.

    Family and domain databases

    Gene3Di 3.30.230.70. 1 hit.
    InterProi IPR001247. ExoRNase_PH_dom1.
    IPR015847. ExoRNase_PH_dom2.
    IPR027408. PNPase/RNase_PH_dom.
    IPR020568. Ribosomal_S5_D2-typ_fold.
    IPR002381. RNase_PH_bac-type.
    IPR018336. RNase_PH_CS.
    [Graphical view ]
    Pfami PF01138. RNase_PH. 1 hit.
    PF03725. RNase_PH_C. 1 hit.
    [Graphical view ]
    SUPFAMi SSF54211. SSF54211. 1 hit.
    SSF55666. SSF55666. 1 hit.
    TIGRFAMsi TIGR01966. RNasePH. 1 hit.
    PROSITEi PS01277. RIBONUCLEASE_PH. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: VCD115 / DSM 17065 / LMG 22923Imported.

    Entry informationi

    Entry nameiC1CZJ0_DEIDV
    AccessioniPrimary (citable) accession number: C1CZJ0
    Entry historyi
    Integrated into UniProtKB/TrEMBL: May 26, 2009
    Last sequence update: May 26, 2009
    Last modified: October 1, 2014
    This is version 31 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteomeImported

    External Data

    Dasty 3