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C1CZJ0

- C1CZJ0_DEIDV

UniProt

C1CZJ0 - C1CZJ0_DEIDV

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Protein
Submitted name: Putative tRNA nucleotidyltransferase (Phosphate-dependent exonuclease) (Ribonuclease PH) (RNase PH)
Gene
rph, Deide_22100
Organism
Deinococcus deserti (strain VCD115 / DSM 17065 / LMG 22923)
Status
Unreviewed - Annotation score: 1 out of 5 - Protein inferred from homologyi

Functioni

Phosphorolytic exoribonuclease that removes nucleotide residues following the -CCA terminus of tRNA and adds nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates By similarity.SAAS annotations

Catalytic activityi

tRNA(n+1) + phosphate = tRNA(n) + a nucleoside diphosphate.SAAS annotations

GO - Molecular functioni

  1. exonuclease activity Source: UniProtKB-KW
  2. nucleotidyltransferase activity Source: UniProtKB-KW
  3. tRNA binding Source: InterPro
  4. tRNA-specific ribonuclease activity Source: InterPro

GO - Biological processi

  1. tRNA processing Source: UniProtKB-KW
Complete GO annotation...

Keywords - Molecular functioni

ExonucleaseImported, Hydrolase, Nuclease, NucleotidyltransferaseSAAS annotations, Transferase

Keywords - Biological processi

tRNA processingSAAS annotations

Enzyme and pathway databases

BioCyciDDES546414:GHOM-2503-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
Putative tRNA nucleotidyltransferase (Phosphate-dependent exonuclease) (Ribonuclease PH) (RNase PH)Imported
Gene namesi
Name:rphImported
Ordered Locus Names:Deide_22100Imported
OrganismiDeinococcus deserti (strain VCD115 / DSM 17065 / LMG 22923)Imported
Taxonomic identifieri546414 [NCBI]
Taxonomic lineageiBacteriaDeinococcus-ThermusDeinococciDeinococcalesDeinococcaceaeDeinococcus
ProteomesiUP000002208: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi546414.Deide_22100.

Family & Domainsi

Phylogenomic databases

eggNOGiCOG0689.
HOGENOMiHOG000229516.
KOiK00989.
OMAiYTEDSAA.
OrthoDBiEOG6CZQQP.

Family and domain databases

Gene3Di3.30.230.70. 1 hit.
InterProiIPR001247. ExoRNase_PH_dom1.
IPR015847. ExoRNase_PH_dom2.
IPR027408. PNPase/RNase_PH_dom.
IPR020568. Ribosomal_S5_D2-typ_fold.
IPR002381. RNase_PH_bac-type.
IPR018336. RNase_PH_CS.
[Graphical view]
PfamiPF01138. RNase_PH. 1 hit.
PF03725. RNase_PH_C. 1 hit.
[Graphical view]
SUPFAMiSSF54211. SSF54211. 1 hit.
SSF55666. SSF55666. 1 hit.
TIGRFAMsiTIGR01966. RNasePH. 1 hit.
PROSITEiPS01277. RIBONUCLEASE_PH. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

C1CZJ0-1 [UniParc]FASTAAdd to Basket

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MTSVQPNKFP PREGRGLLEP RPVSVKRGVN PHAPGSAHLI MGRTEILATV    50
TLEDKPAPHM RGKKEGWLTA EYSMLPRATN DRQARERNLQ NGRRHEIQRL 100
LGRALRASVD LKYFRNQTIY VDCDVLVADG GTRVASILAG HAALHDFCDR 150
LINSGQLSEW PLTHKVGAIS VGLVGEEVRV DLDYAEDKVA RADLNVVATD 200
TGLVIEVQGG AEEGPISLAE YSQLLHTGVQ AIHGVMDELG RELAVIQGV 249
Length:249
Mass (Da):27,199
Last modified:May 26, 2009 - v1
Checksum:i973B2E5D06DF694E
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP001114 Genomic DNA. Translation: ACO47238.1.
RefSeqiWP_012694359.1. NC_012526.1.
YP_002786992.1. NC_012526.1.

Genome annotation databases

EnsemblBacteriaiACO47238; ACO47238; Deide_22100.
GeneIDi7739753.
KEGGiddr:Deide_22100.
PATRICi21618532. VBIDeiDes121019_2535.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP001114 Genomic DNA. Translation: ACO47238.1 .
RefSeqi WP_012694359.1. NC_012526.1.
YP_002786992.1. NC_012526.1.

3D structure databases

ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

STRINGi 546414.Deide_22100.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai ACO47238 ; ACO47238 ; Deide_22100 .
GeneIDi 7739753.
KEGGi ddr:Deide_22100.
PATRICi 21618532. VBIDeiDes121019_2535.

Phylogenomic databases

eggNOGi COG0689.
HOGENOMi HOG000229516.
KOi K00989.
OMAi YTEDSAA.
OrthoDBi EOG6CZQQP.

Enzyme and pathway databases

BioCyci DDES546414:GHOM-2503-MONOMER.

Family and domain databases

Gene3Di 3.30.230.70. 1 hit.
InterProi IPR001247. ExoRNase_PH_dom1.
IPR015847. ExoRNase_PH_dom2.
IPR027408. PNPase/RNase_PH_dom.
IPR020568. Ribosomal_S5_D2-typ_fold.
IPR002381. RNase_PH_bac-type.
IPR018336. RNase_PH_CS.
[Graphical view ]
Pfami PF01138. RNase_PH. 1 hit.
PF03725. RNase_PH_C. 1 hit.
[Graphical view ]
SUPFAMi SSF54211. SSF54211. 1 hit.
SSF55666. SSF55666. 1 hit.
TIGRFAMsi TIGR01966. RNasePH. 1 hit.
PROSITEi PS01277. RIBONUCLEASE_PH. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: VCD115 / DSM 17065 / LMG 22923.

Entry informationi

Entry nameiC1CZJ0_DEIDV
AccessioniPrimary (citable) accession number: C1CZJ0
Entry historyi
Integrated into UniProtKB/TrEMBL: May 26, 2009
Last sequence update: May 26, 2009
Last modified: September 3, 2014
This is version 30 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome

External Data

Dasty 3

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