C1CXD9 (C1CXD9_DEIDV) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Putative Translation initiation factor IF-1 EMBL ACO46856.1

Gene names

Name:	infA EMBL ACO46856.1
Ordered Locus Names:	Deide_18680

Organism

Deinococcus deserti (strain VCD115 / DSM 17065 / LMG 22923) [Complete proteome] [HAMAP]

Taxonomic identifier

546414 [NCBI]

Taxonomic lineage

Bacteria › Deinococcus-Thermus › Deinococci › Deinococcales › Deinococcaceae › Deinococcus

Protein attributes

Sequence length	80 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Sequence similarities

Contains 1 S1-like domain. RuleBase RU004366

Ontologies

Keywords
Biological process	Protein biosynthesis
Molecular function	Initiation factor EMBL ACO46856.1
Technical term	Complete proteome
Gene Ontology (GO)
Molecular function	translation initiation factor activity Inferred from electronic annotation. Source: UniProtKB-KW
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	C1CXD9 [UniParc]. Last modified May 26, 2009. Version 1. Checksum: 8178EE7EFB2DE2D3	FASTA	80	9,343
	10 20 30 40 50 60 MPEQREKRKK EESDTVRAEG VVEEALPNTT FRVKLDTGHD ILAYISGKMR IHYIRILPGD 70 80 RVVLEISPYD TTRGRIVYRK

References

[1]

"Alliance of proteomics and genomics to unravel the specificities of Sahara bacterium Deinococcus deserti." de Groot A., Dulermo R., Ortet P., Blanchard L., Guerin P., Fernandez B., Vacherie B., Dossat C., Jolivet E., Siguier P., Chandler M., Barakat M., Dedieu A., Barbe V., Heulin T., Sommer S., Achouak W., Armengaud J. PLoS Genet. 5:E1000434-E1000434(2009) [PubMed: 19370165] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: VCD115 / DSM 17065 / LMG 22923.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP001114 Genomic DNA. Translation: ACO46856.1.
RefSeq	YP_002786610.1. NC_012526.1.
3D structure databases
ModBase	Search...
Protein-protein interaction databases
STRING	C1CXD9.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	7737566.
GenomeReviews	Gene locus Deide_18680 in contig CP001114_GR.
KEGG	ddr:Deide_18680.
PATRIC	21617730. VBIDeiDes121019_2140.
Organism-specific databases
CMR	Search...
Phylogenomic databases
OMA	KMRMHFI.
ProtClustDB	PRK00276.
Family and domain databases
HAMAP	MF_00075. IF_1. [Tree]
InterPro	IPR012340. NA-bd_OB-fold. IPR016027. NA-bd_OB-fold-like. IPR022967. RNA-binding_domain_S1. IPR006196. RNA-binding_domain_S1_IF1. IPR004368. TIF_IF1. [Graphical view]
Gene3D	G3DSA:2.40.50.140. OB_NA_bd_sub. 1 hit.
KO	K02518.
Pfam	PF01176. eIF-1a. 1 hit. [Graphical view]
SMART	SM00316. S1. 1 hit. [Graphical view]
SUPFAM	SSF50249. Nucleic_acid_OB. 1 hit.
TIGRFAMs	TIGR00008. InfA. 1 hit.
PROSITE	PS50832. S1_IF1_TYPE. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

C1CXD9_DEIDV

Accession

Primary (citable) accession number: C1CXD9

Entry history

Integrated into UniProtKB/TrEMBL:	May 26, 2009
Last sequence update:	May 26, 2009
Last modified:	December 14, 2011
This is version 20 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)