C1CXD3 (RL17_DEIDV) Reviewed, UniProtKB/Swiss-Prot

Names and origin

Protein names

Recommended name:
50S ribosomal protein L17

Gene names

Name:	rplQ
Ordered Locus Names:	Deide_18620

Organism

Deinococcus deserti (strain VCD115 / DSM 17065 / LMG 22923) [Complete proteome] [HAMAP]

Taxonomic identifier

546414 [NCBI]

Taxonomic lineage

Bacteria › Deinococcus-Thermus › Deinococci › Deinococcales › Deinococcaceae › Deinococcus

Protein attributes

Sequence length	116 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Subunit structure	Part of the 50S ribosomal subunit. Contacts protein L32 By similarity.
Sequence similarities	Belongs to the ribosomal protein L17P family.

Ontologies

Keywords
Molecular function	Ribonucleoprotein Ribosomal protein
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	translation Inferred from electronic annotation. Source: InterPro
Cellular component	ribosome Inferred from electronic annotation. Source: UniProtKB-KW
Molecular function	structural constituent of ribosome Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Molecule processing
	Chain	1 – 116	116	50S ribosomal protein L17 HAMAP MF_01368		PRO_1000215000

Sequences

	Sequence		Length	Mass (Da)
	C1CXD3 [UniParc]. Last modified May 26, 2009. Version 1. Checksum: 978D75CCF84B116F	FASTA	116	12,843
	10 20 30 40 50 60 MRHGKAGRKL NRNSSARTAL ARAQATALLR EGRIQTTLTK AKELRPYVEK IITTAKGGDL 70 80 90 100 110 HARRLVAQDI HDNAVVRKVM DEVAPKYAER PGGYTRILRV GTRRGDGVTM ALIELV

References

[1]

"Alliance of proteomics and genomics to unravel the specificities of Sahara bacterium Deinococcus deserti." de Groot A., Dulermo R., Ortet P., Blanchard L., Guerin P., Fernandez B., Vacherie B., Dossat C., Jolivet E., Siguier P., Chandler M., Barakat M., Dedieu A., Barbe V., Heulin T., Sommer S., Achouak W., Armengaud J. PLoS Genet. 5:E1000434-E1000434(2009) [PubMed: 19370165] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: VCD115 / DSM 17065 / LMG 22923.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP001114 Genomic DNA. Translation: ACO46850.1.
RefSeq	YP_002786604.1. NC_012526.1.
3D structure databases
ModBase	Search...
Protein-protein interaction databases
STRING	C1CXD3.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	7737560.
GenomeReviews	Gene locus Deide_18620 in contig CP001114_GR.
KEGG	ddr:Deide_18620.
PATRIC	21617718. VBIDeiDes121019_2134.
Organism-specific databases
CMR	Search...
Phylogenomic databases
OMA	FSELGPR.
ProtClustDB	PRK05591.
Family and domain databases
HAMAP	MF_01368. Ribosomal_L17. [Tree]
InterPro	IPR000456. Ribosomal_L17. [Graphical view]
Gene3D	G3DSA:3.90.1030.10. Ribosomal_L17. 1 hit.
KO	K02879.
PANTHER	PTHR14413. Ribosomal_L17. 1 hit.
Pfam	PF01196. Ribosomal_L17. 1 hit. [Graphical view]
SUPFAM	SSF64263. Ribosomal_L17. 1 hit.
TIGRFAMs	TIGR00059. L17. 1 hit.
PROSITE	PS01167. RIBOSOMAL_L17. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

RL17_DEIDV

Accession

Primary (citable) accession number: C1CXD3

Entry history

Integrated into UniProtKB/Swiss-Prot:	September 22, 2009
Last sequence update:	May 26, 2009
Last modified:	January 25, 2012
This is version 15 of the entry and version 1 of the sequence. [Complete history]

Entry status

Reviewed (UniProtKB/Swiss-Prot)

Annotation program

Prokaryotic Protein Annotation Program