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C1CWY8 (GLGA_DEIDV) Reviewed, UniProtKB/Swiss-Prot

Last modified February 19, 2014. Version 36. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (2) | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize order

Names and origin

Protein namesRecommended name:
Glycogen synthase

EC=2.4.1.21
Alternative name(s):
Starch [bacterial glycogen] synthase
Gene names
Name:glgA
Ordered Locus Names:Deide_17340
OrganismDeinococcus deserti (strain VCD115 / DSM 17065 / LMG 22923) [Complete proteome] [HAMAP]
Taxonomic identifier546414 [NCBI]
Taxonomic lineageBacteriaDeinococcus-ThermusDeinococciDeinococcalesDeinococcaceaeDeinococcus

Protein attributes

Sequence length446 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Function

Synthesizes alpha-1,4-glucan chains using ADP-glucose By similarity. HAMAP-Rule MF_00484

Catalytic activity

ADP-glucose + (1,4-alpha-D-glucosyl)(n) = ADP + (1,4-alpha-D-glucosyl)(n+1). HAMAP-Rule MF_00484

Pathway

Glycan biosynthesis; glycogen biosynthesis. HAMAP-Rule MF_00484

Sequence similarities

Belongs to the glycosyltransferase 1 family. Bacterial/plant glycogen synthase subfamily.

Ontologies

Keywords
   Biological processGlycogen biosynthesis
   Molecular functionGlycosyltransferase
Transferase
   Technical termComplete proteome
Gene Ontology (GO)
   Biological_processglycogen biosynthetic process

Inferred from electronic annotation. Source: UniProtKB-HAMAP

   Molecular_functionstarch synthase activity

Inferred from electronic annotation. Source: UniProtKB-HAMAP

Complete GO annotation...

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Chain1 – 446446Glycogen synthase HAMAP-Rule MF_00484
PRO_1000206425

Sites

Binding site151ADP-glucose By similarity

Sequences

Sequence LengthMass (Da)Tools
C1CWY8 [UniParc].

Last modified May 26, 2009. Version 1.
Checksum: FCBD9535E15E72A7

FASTA44648,539
        10         20         30         40         50         60 
MRVLHVTSEV FPFSRSGGLG DVLGALPAVQ ATLGAQVSVL SPWYGSLAGA PEQIWAGDVA 

        70         80         90        100        110        120 
DVGPVRVGEL RQDGVRFLFL GLPEFEREGL YHPDDVWRFC TYGRAVLPVL RALNEVPDVL 

       130        140        150        160        170        180 
HGHDWQAGLV VAHAHEAGWR TVYTVHNLQY QGRWNLAEAS GWSGLGPAWL THEGAEFYGD 

       190        200        210        220        230        240 
LNLMKAGLIA ANHVTTVSPQ YAREITTQQY GEGLQGVLLR LTLEGRLSGI INGLDQERWN 

       250        260        270        280        290        300 
PRTDPDVPAY SDLAGKAAAT QALRTEFGLD KAPVLGVVSR LADQKGMDLL IEALPRLVHN 

       310        320        330        340        350        360 
WNVVVLGGGD PLLTAALEGW AQHPRVSFAQ GMNEALAHQI YAGSDAFAMP SRFEPCGLSQ 

       370        380        390        400        410        420 
MIAMRYGTLP VVRETGGLVD TVPPDVGFRF QPATPEALVE ACQQARAAFE DQSDWEARVA 

       430        440 
RAMALDFSWD GPAREYLALY ERVVTG 

« Hide

References

[1]"Alliance of proteomics and genomics to unravel the specificities of Sahara bacterium Deinococcus deserti."
de Groot A., Dulermo R., Ortet P., Blanchard L., Guerin P., Fernandez B., Vacherie B., Dossat C., Jolivet E., Siguier P., Chandler M., Barakat M., Dedieu A., Barbe V., Heulin T., Sommer S., Achouak W., Armengaud J.
PLoS Genet. 5:E1000434-E1000434(2009) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: VCD115 / DSM 17065 / LMG 22923.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP001114 Genomic DNA. Translation: ACO46705.1.
RefSeqYP_002786459.1. NC_012526.1.

3D structure databases

ProteinModelPortalC1CWY8.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING546414.Deide_17340.

Proteomic databases

PaxDbC1CWY8.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaACO46705; ACO46705; Deide_17340.
GeneID7737414.
KEGGddr:Deide_17340.
PATRIC21617436. VBIDeiDes121019_1994.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG0297.
HOGENOMHOG000294941.
KOK00703.
OMAVHCNDWQ.
OrthoDBEOG6JTC6Z.
ProtClustDBCLSK444617.

Enzyme and pathway databases

BioCycDDES546414:GHOM-1962-MONOMER.
UniPathwayUPA00164.

Family and domain databases

HAMAPMF_00484. Glycogen_synth.
InterProIPR001296. Glyco_trans_1.
IPR011835. Glycogen/starch_synth.
IPR013534. Starch_synth_cat_dom.
[Graphical view]
PfamPF08323. Glyco_transf_5. 1 hit.
PF00534. Glycos_transf_1. 1 hit.
[Graphical view]
TIGRFAMsTIGR02095. glgA. 1 hit.
ProtoNetSearch...

Entry information

Entry nameGLGA_DEIDV
AccessionPrimary (citable) accession number: C1CWY8
Entry history
Integrated into UniProtKB/Swiss-Prot: September 22, 2009
Last sequence update: May 26, 2009
Last modified: February 19, 2014
This is version 36 of the entry and version 1 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Relevant documents

SIMILARITY comments

Index of protein domains and families

PATHWAY comments

Index of metabolic and biosynthesis pathways