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C1CUX2 (C1CUX2_DEIDV) Unreviewed, UniProtKB/TrEMBL

Last modified January 25, 2012. Version 24. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesRecommended name:
Arginine--tRNA ligase HAMAP MF_00123
EC=6.1.1.19 HAMAP MF_00123
Alternative name(s):
Arginyl-tRNA synthetase HAMAP MF_00123
Gene names
Name:argS HAMAP MF_00123
Ordered Locus Names:Deide_10930 EMBL ACO45989.2
OrganismDeinococcus deserti (strain VCD115 / DSM 17065 / LMG 22923) [Complete proteome] [HAMAP]
Taxonomic identifier546414 [NCBI]
Taxonomic lineageBacteria › Deinococcus-Thermus › Deinococci › Deinococcales › Deinococcaceae › Deinococcus

Protein attributes

Sequence length609 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Catalytic activity

ATP + L-arginine + tRNA(Arg) = AMP + diphosphate + L-arginyl-tRNA(Arg). HAMAP MF_00123

Subunit structure

Monomer By similarity. HAMAP MF_00123

Subcellular location

Cytoplasm By similarity HAMAP MF_00123.

Sequence similarities

Belongs to the class-I aminoacyl-tRNA synthetase family. HAMAP MF_00123 RuleBase RU003489

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Regions

Motif114 – 12411"HIGH" region By similarity HAMAP MF_00123

Sequences

Sequence LengthMass (Da)Tools
C1CUX2 [UniParc].

Last modified March 8, 2011. Version 2.
Checksum: E0DEAA976A92D602

FASTA60966,438
        10         20         30         40         50         60 
MDLKAQLKAA VEAAAQSMGI PVDAAIQDTP ASKPGDYGTP AAFQMAKSAG GNPAQIAAQL 

        70         80         90        100        110        120 
AQTVQLPTGI KRVEAAGPFL NFFLDTAMFV RDVVENPFVM PSLGGKVVIE HTSVNPNKEL 

       130        140        150        160        170        180 
HVGHLRNVVL GDSMARIFRA AGHTVEVQNY IDDTGRQAAE ALFAINHYHR EWDGTQKYDH 

       190        200        210        220        230        240 
WLGEGYVRLN ADPAKPDLEE GISAIMHRLE AGVLRGEVEK VVTAHLQTCF RLGARYDLLN 

       250        260        270        280        290        300 
WESDVVGSGF LTQAMNILES SRYTSRPTEG KYAGAFVMDV SEFMPGLEES NVVLVRSDGT 

       310        320        330        340        350        360 
AMYAAKDIGY QFWKFGLFEG MKFKPFMTDP DGNTVWTSAP DGEPDVQRRF GHADEVINVI 

       370        380        390        400        410        420 
DSRQDHPQTV VRSSLGVAGQ YEKKDRSIHL SYAFVTLEGQ TISGRKGIAV SADDAMDEAE 

       430        440        450        460        470        480 
KRALAALTEL NPDLAAREDA AEIARRIGIG AIRFAMLKAE PTRKIDFRWE QALALNGDTA 

       490        500        510        520        530        540 
PYVQYAAVRA ASILRKAQEA GHNINGSGAD WDALPDVDLA LAKMVARLPE VVAQSVRVHS 

       550        560        570        580        590        600 
PHVVAQYALD LATAFNAWFN AKDRQGKPAT NVLQSEPGLR EARLALVGRL RRAFEETLDL 


IGIEVPAAM

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References

[1]"Alliance of proteomics and genomics to unravel the specificities of Sahara bacterium Deinococcus deserti."
de Groot A., Dulermo R., Ortet P., Blanchard L., Guerin P., Fernandez B., Vacherie B., Dossat C., Jolivet E., Siguier P., Chandler M., Barakat M., Dedieu A., Barbe V., Heulin T., Sommer S., Achouak W., Armengaud J.
PLoS Genet. 5:E1000434-E1000434(2009) [PubMed: 19370165] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: VCD115 / DSM 17065 / LMG 22923.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		CP001114 Genomic DNA. Translation: ACO45989.2.
RefSeqYP_002785743.2. NC_012526.1.

3D structure databases

ModBaseSearch...

Protein-protein interaction databases

STRINGC1CUX2.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID7739562.
GenomeReviewsGene locus Deide_10930 in contig CP001114_GR.
KEGGddr:Deide_10930.
PATRIC21615920. VBIDeiDes121019_1243.

Organism-specific databases

CMRSearch...

Family and domain databases

HAMAPMF_00123. Arg_tRNA_synth.
[Tree]
InterProIPR001412. aa-tRNA-synth_I_CS.
IPR001278. Arg-tRNA-synth_Ia.
IPR015945. Arg-tRNA-synth_Ia_core.
IPR005148. Arg-tRNA-synth_N.
IPR008909. DALR_anticod-bd.
IPR014729. Rossmann-like_a/b/a_fold.
IPR009080. tRNAsynth_1a_anticodon-bd.
[Graphical view]
Gene3DG3DSA:3.30.1360.70. Arg-tRNA-synth_Ic_N. 1 hit.
G3DSA:3.40.50.620. Rossmann-like_a/b/a_fold. 1 hit.
KOK01887.
PANTHERPTHR11956. Arg_tRNA-synt_1c. 1 hit.
PfamPF03485. Arg_tRNA_synt_N. 1 hit.
PF05746. DALR_1. 1 hit.
PF00750. tRNA-synt_1d. 2 hits.
[Graphical view]
PRINTSPR01038. TRNASYNTHARG.
SMARTSM01016. Arg_tRNA_synt_N. 1 hit.
SM00836. DALR_1. 1 hit.
[Graphical view]
SUPFAMSSF55190. Arg-tRNA-synth_Ic_N. 1 hit.
SSF47323. tRNAsyn_1a_bind. 1 hit.
PROSITEPS00178. AA_TRNA_LIGASE_I. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameC1CUX2_DEIDV
AccessionPrimary (citable) accession number: C1CUX2
Entry history
Integrated into UniProtKB/TrEMBL: May 26, 2009
Last sequence update: March 8, 2011
Last modified: January 25, 2012
This is version 24 of the entry and version 2 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info