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C1CRW4 (C1CRW4_STRZT) Unreviewed, UniProtKB/TrEMBL

Last modified November 13, 2013. Version 34. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesRecommended name:
Pseudouridine synthase RuleBase RU003886

EC=5.4.99.- RuleBase RU003886
Gene names
Ordered Locus Names:SPT_1270 EMBL ACO23773.1
OrganismStreptococcus pneumoniae (strain Taiwan19F-14) [Complete proteome] [HAMAP] EMBL ACO23773.1
Taxonomic identifier487213 [NCBI]
Taxonomic lineageBacteriaFirmicutesBacilliLactobacillalesStreptococcaceaeStreptococcus

Protein attributes

Sequence length295 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Sequence similarities

Belongs to the pseudouridine synthase rluA family. RuleBase RU004243

Ontologies

Keywords
   Molecular functionIsomerase RuleBase RU003886 EMBL ACO23773.1
   Technical termComplete proteome
Gene Ontology (GO)
   Biological_processpseudouridine synthesis

Inferred from electronic annotation. Source: InterPro

   Molecular_functionRNA binding

Inferred from electronic annotation. Source: InterPro

pseudouridine synthase activity

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
C1CRW4 [UniParc].

Last modified May 26, 2009. Version 1.
Checksum: 6523294DBCE09964

FASTA29532,841
        10         20         30         40         50         60 
MEIKIETGGL RLDKALSDLS ELSRSLANEQ IKSGQVLVNG QVKKAKYTVQ EGDVVTYHVP 

        70         80         90        100        110        120 
EPEVLEYVAE DLPLEIVYQD EDVAVVNKPQ GMVVHPSAGH TSGTLVNALM YHIKDLSGIN 

       130        140        150        160        170        180 
GVLRPGIVHR IDKDTSGLLM IAKNDDAHLA LAQELKDKKS LRKYWAIVHG NLPNDRGVIE 

       190        200        210        220        230        240 
APIGRSEKDR KKQAVTAKGK PAVTRFHVLE RFGDYSLVEL QLETGRTHQI RVHMAYIGHS 

       250        260        270        280        290 
VAGDEVYGPR KTLKGHGQFL HAKTLGFTHP RTGKTLEFKA DIPEIFKETL ERLRK 

« Hide

References

[1]"Complete genome sequence of Streptococcus pneumoniae strain Taiwan19F-14."
Hotopp J.D., Censini S., Masignani V., Covacci A., Tettelin H.
Submitted (DEC-2007) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: Taiwan19F-14.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP000921 Genomic DNA. Translation: ACO23773.1.
RefSeqYP_002742686.1. NC_012469.1.

3D structure databases

ProteinModelPortalC1CRW4.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING487213.SPT_1270.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaACO23773; ACO23773; SPT_1270.
GeneID7686724.
KEGGsnt:SPT_1270.
PATRIC19711722. VBIStrPne22502_1308.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG0564.
HOGENOMHOG000275919.
KOK06180.
OMAPSITHYE.
OrthoDBEOG6P070X.
ProtClustDBCLSK877106.

Enzyme and pathway databases

BioCycSPNE487213:GI07-1235-MONOMER.

Family and domain databases

Gene3D3.10.290.10. 1 hit.
InterProIPR020103. PsdUridine_synth_cat_dom.
IPR006225. PsdUridine_synth_RluC/D.
IPR006224. PsdUridine_synth_RluC/D_CS.
IPR006145. PsdUridine_synth_RsuA/RluD.
IPR002942. S4_RNA-bd.
[Graphical view]
PfamPF00849. PseudoU_synth_2. 1 hit.
PF01479. S4. 1 hit.
[Graphical view]
SMARTSM00363. S4. 1 hit.
[Graphical view]
SUPFAMSSF55120. SSF55120. 1 hit.
TIGRFAMsTIGR00005. rluA_subfam. 1 hit.
PROSITEPS01129. PSI_RLU. 1 hit.
PS50889. S4. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameC1CRW4_STRZT
AccessionPrimary (citable) accession number: C1CRW4
Entry history
Integrated into UniProtKB/TrEMBL: May 26, 2009
Last sequence update: May 26, 2009
Last modified: November 13, 2013
This is version 34 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)