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C1CMI6

- SCPA_STRZP

UniProt

C1CMI6 - SCPA_STRZP

Protein

Segregation and condensation protein A

Gene

scpA

Organism
Streptococcus pneumoniae (strain P1031)
Status
Reviewed - Annotation score: 2 out of 5- Experimental evidence at protein leveli
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    • History
      Entry version 33 (01 Oct 2014)
      Sequence version 1 (26 May 2009)
      Previous versions | rss
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    Functioni

    Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves.UniRule annotation

    GO - Biological processi

    1. cell cycle Source: UniProtKB-KW
    2. cell division Source: UniProtKB-KW
    3. chromosome segregation Source: UniProtKB-KW

    Keywords - Biological processi

    Cell cycle, Cell division, Chromosome partition

    Enzyme and pathway databases

    BioCyciSPNE488223:GHE7-1839-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    Segregation and condensation protein AUniRule annotation
    Gene namesi
    Name:scpAUniRule annotation
    Ordered Locus Names:SPP_1876
    OrganismiStreptococcus pneumoniae (strain P1031)
    Taxonomic identifieri488223 [NCBI]
    Taxonomic lineageiBacteriaFirmicutesBacilliLactobacillalesStreptococcaceaeStreptococcus
    ProteomesiUP000002202: Chromosome

    Subcellular locationi

    Cytoplasm UniRule annotation
    Note: Associated with two foci at the outer edges of the nucleoid region in young cells, and at four foci within both cell halves in older cells.UniRule annotation

    GO - Cellular componenti

    1. cytoplasm Source: UniProtKB-SubCell

    Keywords - Cellular componenti

    Cytoplasm

    PTM / Processingi

    Molecule processing

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Chaini1 – 242242Segregation and condensation protein APRO_1000187576Add
    BLAST

    Interactioni

    Subunit structurei

    Component of a cohesin-like complex composed of ScpA, ScpB and the Smc homodimer, in which ScpA and ScpB bind to the head domain of Smc. The presence of the three proteins is required for the association of the complex with DNA.UniRule annotation

    Protein-protein interaction databases

    STRINGi488223.SPP_1876.

    Structurei

    Secondary structure

    1
    242
    Legend: HelixTurnBeta strand
    Show more details
    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Helixi11 – 2111
    Beta strandi24 – 263
    Helixi31 – 4414
    Turni45 – 484
    Helixi55 – 7117
    Helixi81 – 11434
    Helixi137 – 15216

    3D structure databases

    Select the link destinations:
    PDBe
    RCSB PDB
    PDBj
    Links Updated
    EntryMethodResolution (Å)ChainPositionsPDBsum
    4I98X-ray2.80A1-160[»]
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Sequence similaritiesi

    Belongs to the ScpA family.UniRule annotation

    Phylogenomic databases

    eggNOGiCOG1354.
    HOGENOMiHOG000242824.
    KOiK05896.
    OMAiRIEDMME.
    OrthoDBiEOG6CZQPX.

    Family and domain databases

    HAMAPiMF_01805. ScpA.
    InterProiIPR003768. ScpA.
    [Graphical view]
    PfamiPF02616. ScpA_ScpB. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    C1CMI6-1 [UniParc]FASTAAdd to Basket

    « Hide

    MDIKLKDFEG PLDLLLHLVS KYQMDIYDVP ITEVIEQYLA YVSTLQAMRL    50
    EVTGEYMVMA SQLMLIKSRK LLPKVAEVTD LGDDLEQDLL SQIEEYRKFK 100
    LLGEHLEAKH QERAQYYSKA PTELIYEDAE LVHDKTTIDL FLAFSNILAK 150
    KKEEFAQNHT TILRDEYKIE DMMIIVKESL IGRDQLRLQD LFKEAQNVQE 200
    VITLFLATLE LIKTQELILV QEESFGDIYL MEKKEESQVP QS 242
    Length:242
    Mass (Da):28,270
    Last modified:May 26, 2009 - v1
    Checksum:iF200571AD5DA440E
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP000920 Genomic DNA. Translation: ACO21653.1.
    RefSeqiYP_002738974.1. NC_012467.1.

    Genome annotation databases

    EnsemblBacteriaiACO21653; ACO21653; SPP_1876.
    GeneIDi7682425.
    KEGGispp:SPP_1876.
    PATRICi32461126. VBIStrPne91701_1957.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP000920 Genomic DNA. Translation: ACO21653.1 .
    RefSeqi YP_002738974.1. NC_012467.1.

    3D structure databases

    Select the link destinations:
    PDBe
    RCSB PDB
    PDBj
    Links Updated
    Entry Method Resolution (Å) Chain Positions PDBsum
    4I98 X-ray 2.80 A 1-160 [» ]
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 488223.SPP_1876.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai ACO21653 ; ACO21653 ; SPP_1876 .
    GeneIDi 7682425.
    KEGGi spp:SPP_1876.
    PATRICi 32461126. VBIStrPne91701_1957.

    Phylogenomic databases

    eggNOGi COG1354.
    HOGENOMi HOG000242824.
    KOi K05896.
    OMAi RIEDMME.
    OrthoDBi EOG6CZQPX.

    Enzyme and pathway databases

    BioCyci SPNE488223:GHE7-1839-MONOMER.

    Family and domain databases

    HAMAPi MF_01805. ScpA.
    InterProi IPR003768. ScpA.
    [Graphical view ]
    Pfami PF02616. ScpA_ScpB. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. "Complete genome sequence of Streptococcus pneumoniae strain P1031."
      Hotopp J.D., Censini S., Masignani V., Covacci A., Tettelin H.
      Submitted (DEC-2007) to the EMBL/GenBank/DDBJ databases
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: P1031.

    Entry informationi

    Entry nameiSCPA_STRZP
    AccessioniPrimary (citable) accession number: C1CMI6
    Entry historyi
    Integrated into UniProtKB/Swiss-Prot: July 28, 2009
    Last sequence update: May 26, 2009
    Last modified: October 1, 2014
    This is version 33 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiReviewed (UniProtKB/Swiss-Prot)
    Annotation programProkaryotic Protein Annotation Program

    Miscellaneousi

    Keywords - Technical termi

    3D-structure, Complete proteome

    Documents

    1. PDB cross-references
      Index of Protein Data Bank (PDB) cross-references
    2. SIMILARITY comments
      Index of protein domains and families

    External Data

    Dasty 3